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IGVFDS0956TMWA

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)
Protocols
Aliases
bradley-bernstein:scATAC Lib 116
buenrostro-bernstein:scATAC Lib 116

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
250
Read 2, Barcode index
355 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
260
Read 1
203 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
260
Read 2, Barcode index
353 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
250
Read 1
204 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1503
  • buenrostro-bernstein:Donor 1503
female
Mus musculus

Related Multiome Datasets

5 items
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 126
  • buenrostro-bernstein:scRNA Lib 126
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 125
  • buenrostro-bernstein:scRNA Lib 125
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 124
  • buenrostro-bernstein:scRNA Lib 124
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 115
  • buenrostro-bernstein:scATAC Lib 115
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 117
  • buenrostro-bernstein:scATAC Lib 117
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad