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IGVFDS0937CDYE

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 171)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 391
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

45 items
Read Names
fastq
reads
R2
9013
Read 2
22LMVNLT4
1.7 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8917
Read 1
22LMVNLT4
1.7 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4087
Read 2
22523KLT3
620 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8917
Read 2
22LMVNLT4
1.6 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8629
Barcode index
22LMVNLT4
1.1 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8629
Read 1
22LMVNLT4
1.8 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8821
Barcode index
22LMVNLT4
1.1 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8629
Read 2
22LMVNLT4
1.8 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1047
Read 2
22773CLT3
82 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8533
Barcode index
22LMVNLT4
1.1 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 171)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 418
Jason Buenrostro, Broad