IGVFDS0709NNUQ

released
GRU
1{
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11        "buenrostro-bernstein:scATAC Lib 584"
12    ],
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14        "@id": "/assay-terms/OBI_0002764/",
15        "assay_slims": [
16            "chromatin accessibility"
17        ],
18        "status": "released",
19        "term_name": "single-cell ATAC-seq"
20    },
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23            {
24                "category": "missing publication",
25                "detail": "Measurement set [IGVFDS0709NNUQ](/measurement-sets/IGVFDS0709NNUQ/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
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29                "path": "/measurement-sets/IGVFDS0709NNUQ/"
30            },
31            {
32                "category": "mismatched status",
33                "detail": "Released measurement set [IGVFDS0709NNUQ](/measurement-sets/IGVFDS0709NNUQ/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_item_status",
37                "path": "/measurement-sets/IGVFDS0709NNUQ/"
38            },
39            {
40                "category": "mismatched status",
41                "detail": "Released measurement set [IGVFDS0709NNUQ](/measurement-sets/IGVFDS0709NNUQ/) has in progress subobject tabular file [IGVFFI8433TDKP](/tabular-files/IGVFFI8433TDKP/).",
42                "level": 30,
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44                "name": "audit_item_status",
45                "path": "/measurement-sets/IGVFDS0709NNUQ/"
46            },
47            {
48                "category": "missing publication",
49                "detail": "In vitro system [IGVFSM4798GESQ](/in-vitro-systems/IGVFSM4798GESQ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_sample_missing_publication",
53                "path": "/in-vitro-systems/IGVFSM4798GESQ/"
54            }
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56    },
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59        "component": "mapping",
60        "contact_pi": {
61            "@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
62            "title": "Jason Buenrostro"
63        },
64        "title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
65    },
66    "control_for": [],
67    "controlled_access": true,
68    "creation_timestamp": "2024-08-20T14:58:22.079971+00:00",
69    "data_use_limitation_summaries": [
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88            ],
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92        },
93        {
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95            "accession": "IGVFDO2476MGFK",
96            "aliases": [
97                "buenrostro-bernstein:Donor 1901"
98            ],
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100            "status": "released",
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103        {
104            "@id": "/human-donors/IGVFDO7506JTFC/",
105            "accession": "IGVFDO7506JTFC",
106            "aliases": [
107                "buenrostro-bernstein:Donor 1931"
108            ],
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111            "taxa": "Homo sapiens"
112        },
113        {
114            "@id": "/human-donors/IGVFDO3633ISAY/",
115            "accession": "IGVFDO3633ISAY",
116            "aliases": [
117                "buenrostro-bernstein:Donor 1915"
118            ],
119            "sex": "unspecified",
120            "status": "released",
121            "taxa": "Homo sapiens"
122        },
123        {
124            "@id": "/human-donors/IGVFDO5859XGBW/",
125            "accession": "IGVFDO5859XGBW",
126            "aliases": [
127                "buenrostro-bernstein:Donor 1971"
128            ],
129            "sex": "unspecified",
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131            "taxa": "Homo sapiens"
132        },
133        {
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135            "accession": "IGVFDO2811ZFFP",
136            "aliases": [
137                "buenrostro-bernstein:Donor 1913"
138            ],
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140            "status": "released",
141            "taxa": "Homo sapiens"
142        },
143        {
144            "@id": "/human-donors/IGVFDO6296JPHU/",
145            "accession": "IGVFDO6296JPHU",
146            "aliases": [
147                "buenrostro-bernstein:Donor 1918"
148            ],
149            "sex": "unspecified",
150            "status": "released",
151            "taxa": "Homo sapiens"
152        },
153        {
154            "@id": "/human-donors/IGVFDO3010FULG/",
155            "accession": "IGVFDO3010FULG",
156            "aliases": [
157                "buenrostro-bernstein:Donor 1929"
158            ],
159            "sex": "unspecified",
160            "status": "released",
161            "taxa": "Homo sapiens"
162        },
163        {
164            "@id": "/human-donors/IGVFDO9907ZZVD/",
165            "accession": "IGVFDO9907ZZVD",
166            "aliases": [
167                "buenrostro-bernstein:Donor 1902"
168            ],
169            "sex": "unspecified",
170            "status": "released",
171            "taxa": "Homo sapiens"
172        },
173        {
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176            "aliases": [
177                "buenrostro-bernstein:Donor 1900"
178            ],
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181            "taxa": "Homo sapiens"
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183        {
184            "@id": "/human-donors/IGVFDO5920NCRK/",
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192        },
193        {
194            "@id": "/human-donors/IGVFDO4974JBDF/",
195            "accession": "IGVFDO4974JBDF",
196            "aliases": [
197                "buenrostro-bernstein:Donor 1906"
198            ],
199            "sex": "unspecified",
200            "status": "released",
201            "taxa": "Homo sapiens"
202        },
203        {
204            "@id": "/human-donors/IGVFDO4923LWHA/",
205            "accession": "IGVFDO4923LWHA",
206            "aliases": [
207                "buenrostro-bernstein:Donor 1957"
208            ],
209            "sex": "unspecified",
210            "status": "released",
211            "taxa": "Homo sapiens"
212        },
213        {
214            "@id": "/human-donors/IGVFDO9115TZAP/",
215            "accession": "IGVFDO9115TZAP",
216            "aliases": [
217                "buenrostro-bernstein:Donor 1766"
218            ],
219            "sex": "unspecified",
220            "status": "released",
221            "taxa": "Homo sapiens"
222        },
223        {
224            "@id": "/human-donors/IGVFDO8195QBTP/",
225            "accession": "IGVFDO8195QBTP",
226            "aliases": [
227                "buenrostro-bernstein:Donor 1958"
228            ],
229            "sex": "unspecified",
230            "status": "released",
231            "taxa": "Homo sapiens"
232        },
233        {
234            "@id": "/human-donors/IGVFDO2318JQUM/",
235            "accession": "IGVFDO2318JQUM",
236            "aliases": [
237                "buenrostro-bernstein:Donor 1791"
238            ],
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240            "status": "released",
241            "taxa": "Homo sapiens"
242        },
243        {
244            "@id": "/human-donors/IGVFDO5566VPJU/",
245            "accession": "IGVFDO5566VPJU",
246            "aliases": [
247                "buenrostro-bernstein:Donor 1908"
248            ],
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250            "status": "released",
251            "taxa": "Homo sapiens"
252        },
253        {
254            "@id": "/human-donors/IGVFDO5046RYOV/",
255            "accession": "IGVFDO5046RYOV",
256            "aliases": [
257                "buenrostro-bernstein:Donor 1949"
258            ],
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261            "taxa": "Homo sapiens"
262        },
263        {
264            "@id": "/human-donors/IGVFDO0211CZWE/",
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267                "buenrostro-bernstein:Donor 1909"
268            ],
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288            ],
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293        {
294            "@id": "/human-donors/IGVFDO8124AYVF/",
295            "accession": "IGVFDO8124AYVF",
296            "aliases": [
297                "buenrostro-bernstein:Donor 1740"
298            ],
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301            "taxa": "Homo sapiens"
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303        {
304            "@id": "/human-donors/IGVFDO0123YZDN/",
305            "accession": "IGVFDO0123YZDN",
306            "aliases": [
307                "buenrostro-bernstein:Donor 1943"
308            ],
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311            "taxa": "Homo sapiens"
312        },
313        {
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315            "accession": "IGVFDO4207CTJX",
316            "aliases": [
317                "buenrostro-bernstein:Donor 1923"
318            ],
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323        {
324            "@id": "/human-donors/IGVFDO3385RWXZ/",
325            "accession": "IGVFDO3385RWXZ",
326            "aliases": [
327                "buenrostro-bernstein:Donor 1780"
328            ],
329            "sex": "unspecified",
330            "status": "released",
331            "taxa": "Homo sapiens"
332        },
333        {
334            "@id": "/human-donors/IGVFDO1512EGWF/",
335            "accession": "IGVFDO1512EGWF",
336            "aliases": [
337                "buenrostro-bernstein:Donor 1981"
338            ],
339            "sex": "unspecified",
340            "status": "released",
341            "taxa": "Homo sapiens"
342        },
343        {
344            "@id": "/human-donors/IGVFDO2217VSIY/",
345            "accession": "IGVFDO2217VSIY",
346            "aliases": [
347                "buenrostro-bernstein:Donor 1955"
348            ],
349            "sex": "unspecified",
350            "status": "released",
351            "taxa": "Homo sapiens"
352        },
353        {
354            "@id": "/human-donors/IGVFDO8776OLQD/",
355            "accession": "IGVFDO8776OLQD",
356            "aliases": [
357                "buenrostro-bernstein:Donor 1744"
358            ],
359            "sex": "unspecified",
360            "status": "released",
361            "taxa": "Homo sapiens"
362        },
363        {
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366            "aliases": [
367                "buenrostro-bernstein:Donor 1954"
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371            "taxa": "Homo sapiens"
372        },
373        {
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381            "taxa": "Homo sapiens"
382        },
383        {
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392        },
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423        {
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426            "aliases": [
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431            "taxa": "Homo sapiens"
432        },
433        {
434            "@id": "/human-donors/IGVFDO9079MLOT/",
435            "accession": "IGVFDO9079MLOT",
436            "aliases": [
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438            ],
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441            "taxa": "Homo sapiens"
442        },
443        {
444            "@id": "/human-donors/IGVFDO1363RREJ/",
445            "accession": "IGVFDO1363RREJ",
446            "aliases": [
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448            ],
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451            "taxa": "Homo sapiens"
452        },
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462        },
463        {
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466            "aliases": [
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468            ],
469            "sex": "unspecified",
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471            "taxa": "Homo sapiens"
472        },
473        {
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478            ],
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481            "taxa": "Homo sapiens"
482        },
483        {
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485            "accession": "IGVFDO4924NHKE",
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488            ],
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491            "taxa": "Homo sapiens"
492        },
493        {
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495            "accession": "IGVFDO8663MIYC",
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498            ],
499            "sex": "unspecified",
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501            "taxa": "Homo sapiens"
502        },
503        {
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506            "aliases": [
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511            "taxa": "Homo sapiens"
512        },
513        {
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515            "accession": "IGVFDO0436YOXD",
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518            ],
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520            "status": "released",
521            "taxa": "Homo sapiens"
522        },
523        {
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525            "accession": "IGVFDO7018SAYO",
526            "aliases": [
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529            "sex": "unspecified",
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531            "taxa": "Homo sapiens"
532        },
533        {
534            "@id": "/human-donors/IGVFDO4747GRSS/",
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539            "sex": "unspecified",
540            "status": "released",
541            "taxa": "Homo sapiens"
542        },
543        {
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551            "taxa": "Homo sapiens"
552        },
553        {
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556            "aliases": [
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558            ],
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560            "status": "released",
561            "taxa": "Homo sapiens"
562        },
563        {
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566            "aliases": [
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569            "sex": "unspecified",
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571            "taxa": "Homo sapiens"
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573        {
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581            "taxa": "Homo sapiens"
582        },
583        {
584            "@id": "/human-donors/IGVFDO6075RUJJ/",
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595            "accession": "IGVFDO3115AJIV",
596            "aliases": [
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598            ],
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600            "status": "released",
601            "taxa": "Homo sapiens"
602        },
603        {
604            "@id": "/human-donors/IGVFDO9063CMXP/",
605            "accession": "IGVFDO9063CMXP",
606            "aliases": [
607                "buenrostro-bernstein:Donor 1979"
608            ],
609            "sex": "unspecified",
610            "status": "released",
611            "taxa": "Homo sapiens"
612        },
613        {
614            "@id": "/human-donors/IGVFDO2967OWUY/",
615            "accession": "IGVFDO2967OWUY",
616            "aliases": [
617                "buenrostro-bernstein:Donor 1989"
618            ],
619            "sex": "unspecified",
620            "status": "released",
621            "taxa": "Homo sapiens"
622        },
623        {
624            "@id": "/human-donors/IGVFDO6183QMMP/",
625            "accession": "IGVFDO6183QMMP",
626            "aliases": [
627                "buenrostro-bernstein:Donor 1788"
628            ],
629            "sex": "unspecified",
630            "status": "released",
631            "taxa": "Homo sapiens"
632        },
633        {
634            "@id": "/human-donors/IGVFDO4048DUKN/",
635            "accession": "IGVFDO4048DUKN",
636            "aliases": [
637                "buenrostro-bernstein:Donor 1968"
638            ],
639            "sex": "unspecified",
640            "status": "released",
641            "taxa": "Homo sapiens"
642        },
643        {
644            "@id": "/human-donors/IGVFDO4983SZXB/",
645            "accession": "IGVFDO4983SZXB",
646            "aliases": [
647                "buenrostro-bernstein:Donor 1988"
648            ],
649            "sex": "unspecified",
650            "status": "released",
651            "taxa": "Homo sapiens"
652        },
653        {
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1676    },
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1678    "onlist_files": [
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1680        "/tabular-files/IGVFFI0400MBIM/"
1681    ],
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1684    "protocols": [
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1686    ],
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1709            "classifications": [
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1720                },
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1734                },
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1741                },
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1748                },
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1755                },
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1762                },
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1769                },
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1776                },
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1781                    "data_use_limitation": "GRU",
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1783                },
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1788                    "data_use_limitation": "GRU",
1789                    "status": "released"
1790                },
1791                {
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1795                    "data_use_limitation": "GRU",
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1797                },
1798                {
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1802                    "data_use_limitation": "GRU",
1803                    "status": "released"
1804                },
1805                {
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1807                    "certificate_identifier": "IP113-15",
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1809                    "data_use_limitation": "GRU",
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1811                },
1812                {
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1814                    "certificate_identifier": "IP113-13",
1815                    "controlled_access": true,
1816                    "data_use_limitation": "GRU",
1817                    "status": "released"
1818                },
1819                {
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1821                    "certificate_identifier": "IP113-16",
1822                    "controlled_access": true,
1823                    "data_use_limitation": "GRU",
1824                    "status": "released"
1825                },
1826                {
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1828                    "certificate_identifier": "IP113-18",
1829                    "controlled_access": true,
1830                    "data_use_limitation": "GRU",
1831                    "status": "released"
1832                },
1833                {
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1835                    "certificate_identifier": "IP113-17",
1836                    "controlled_access": true,
1837                    "data_use_limitation": "GRU",
1838                    "status": "released"
1839                },
1840                {
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1842                    "certificate_identifier": "IP113-19",
1843                    "controlled_access": true,
1844                    "data_use_limitation": "GRU",
1845                    "status": "released"
1846                },
1847                {
1848                    "@id": "/institutional-certificates/d1431ff4-0095-49ba-a179-5fe34043afeb/",
1849                    "certificate_identifier": "IP113-20",
1850                    "controlled_access": true,
1851                    "data_use_limitation": "GRU",
1852                    "status": "released"
1853                }
1854            ],
1855            "sample_terms": [
1856                {
1857                    "@id": "/sample-terms/EFO_0004905/",
1858                    "@type": [
1859                        "SampleTerm",
1860                        "OntologyTerm",
1861                        "Item"
1862                    ],
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1864                    "summary": "induced pluripotent stem cell",
1865                    "term_name": "induced pluripotent stem cell"
1866                }
1867            ],
1868            "status": "released",
1869            "summary": "Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 205)",
1870            "taxa": "Homo sapiens"
1871        }
1872    ],
1873    "schema_version": "26",
1874    "status": "released",
1875    "submitted_by": {
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1877        "title": "Siddarth Wekhande"
1878    },
1879    "submitted_files_timestamp": "2024-08-20T15:09:10.194817+00:00",
1880    "summary": "single-cell ATAC-seq (SHARE-seq)",
1881    "uuid": "ac93b9e5-131e-4eb4-8180-1ecbfdaed606"
1882}