{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS0698PXMG/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS0698PXMG",
"aliases": [
"igvf:corces_measurementSet_X023_G5_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [bf9c75cf-8f7f-44ab-ab3e-d796bc759162](/phenotypic-features/bf9c75cf-8f7f-44ab-ab3e-d796bc759162/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [e40b23ca-8049-458d-9daa-2d9a7bfe205d](/phenotypic-features/e40b23ca-8049-458d-9daa-2d9a7bfe205d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [0ffc3098-10e0-4829-bbfd-b484f751c849](/phenotypic-features/0ffc3098-10e0-4829-bbfd-b484f751c849/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [9ea884c0-3c76-4fde-8e4c-ae0c38797da1](/phenotypic-features/9ea884c0-3c76-4fde-8e4c-ae0c38797da1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [a4aaf673-9174-4844-847b-c78dabed6ad5](/phenotypic-features/a4aaf673-9174-4844-847b-c78dabed6ad5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [aa1d3d22-9591-48ff-805a-7b96892820fd](/phenotypic-features/aa1d3d22-9591-48ff-805a-7b96892820fd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [d94cc348-4571-4d2f-9e2c-1ae4e0c4c857](/phenotypic-features/d94cc348-4571-4d2f-9e2c-1ae4e0c4c857/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [9d52ea4c-996d-4ee1-b1af-0bd95b6b700b](/phenotypic-features/9d52ea4c-996d-4ee1-b1af-0bd95b6b700b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [a282f810-1f87-49f2-9fbf-1ebfbdfd0767](/phenotypic-features/a282f810-1f87-49f2-9fbf-1ebfbdfd0767/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [3ea18406-059b-4181-ad35-c617adcf8f07](/phenotypic-features/3ea18406-059b-4181-ad35-c617adcf8f07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [16dd0641-17b5-4e28-8df8-c1557d69956e](/phenotypic-features/16dd0641-17b5-4e28-8df8-c1557d69956e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [0130d925-ca8e-441c-a725-9525a350da63](/phenotypic-features/0130d925-ca8e-441c-a725-9525a350da63/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [f2944cd8-3e11-46e3-8dd8-a60165632a59](/phenotypic-features/f2944cd8-3e11-46e3-8dd8-a60165632a59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3628ZBBZ](/human-donors/IGVFDO3628ZBBZ/) has in progress subobject phenotypic feature [0a57d072-d2db-41b5-bc20-8d466b3599c9](/phenotypic-features/0a57d072-d2db-41b5-bc20-8d466b3599c9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3628ZBBZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3628ZBBZ](/human-donors/IGVFDO3628ZBBZ/) has in progress subobject phenotypic feature [f31addd5-72e8-406b-872b-b9f40cd6e3a4](/phenotypic-features/f31addd5-72e8-406b-872b-b9f40cd6e3a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3628ZBBZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3628ZBBZ](/human-donors/IGVFDO3628ZBBZ/) has in progress subobject phenotypic feature [2a28161e-ce79-47f7-a1f1-2828fd549e17](/phenotypic-features/2a28161e-ce79-47f7-a1f1-2828fd549e17/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3628ZBBZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3628ZBBZ](/human-donors/IGVFDO3628ZBBZ/) has in progress subobject phenotypic feature [db447dd4-ae2a-435f-af66-c26e66a906df](/phenotypic-features/db447dd4-ae2a-435f-af66-c26e66a906df/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3628ZBBZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3628ZBBZ](/human-donors/IGVFDO3628ZBBZ/) has in progress subobject phenotypic feature [0db57625-0af4-4d61-a9f4-831242ca64e6](/phenotypic-features/0db57625-0af4-4d61-a9f4-831242ca64e6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3628ZBBZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [6398d5ed-9d64-42a5-bf1a-e4d9e52057b5](/phenotypic-features/6398d5ed-9d64-42a5-bf1a-e4d9e52057b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [b52127d9-b46f-4047-b2f5-3cd75d0933f0](/phenotypic-features/b52127d9-b46f-4047-b2f5-3cd75d0933f0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [f3c96e1e-630f-47c2-8e2d-5c9ba8d18598](/phenotypic-features/f3c96e1e-630f-47c2-8e2d-5c9ba8d18598/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [72f27db2-904b-4967-b919-f7c013e2eec8](/phenotypic-features/72f27db2-904b-4967-b919-f7c013e2eec8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee](/phenotypic-features/30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [be888d35-90a2-4dc6-8192-63ff7c0a544d](/phenotypic-features/be888d35-90a2-4dc6-8192-63ff7c0a544d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156](/phenotypic-features/9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc](/phenotypic-features/6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [d8416687-8d5b-433e-a553-eb11125a2fa6](/phenotypic-features/d8416687-8d5b-433e-a553-eb11125a2fa6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [0026a1b8-bc9b-4ca3-8550-db33dea01cf2](/phenotypic-features/0026a1b8-bc9b-4ca3-8550-db33dea01cf2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [20739539-1577-4aa9-a16f-e48042d342a1](/phenotypic-features/20739539-1577-4aa9-a16f-e48042d342a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [cd2525eb-a90d-47c1-a053-cd3376cd23d1](/phenotypic-features/cd2525eb-a90d-47c1-a053-cd3376cd23d1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [ef944fd3-8635-4e0f-bad8-48136e7c6408](/phenotypic-features/ef944fd3-8635-4e0f-bad8-48136e7c6408/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [1961d5fc-9987-47f0-8cdf-9dae2203185c](/phenotypic-features/1961d5fc-9987-47f0-8cdf-9dae2203185c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [025a53bb-7c23-42cb-9752-3516f17f6187](/phenotypic-features/025a53bb-7c23-42cb-9752-3516f17f6187/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b](/phenotypic-features/93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [d900f184-9bf7-4b9c-8d20-0d40c6b16435](/phenotypic-features/d900f184-9bf7-4b9c-8d20-0d40c6b16435/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [140f7109-4076-4532-90af-d8a061e38b9e](/phenotypic-features/140f7109-4076-4532-90af-d8a061e38b9e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [739c8fdc-61dc-4501-a392-adee0ae4fc0a](/phenotypic-features/739c8fdc-61dc-4501-a392-adee0ae4fc0a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [73238fee-a419-42c3-b590-6ce878f036a7](/phenotypic-features/73238fee-a419-42c3-b590-6ce878f036a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [73ee2a00-02ce-4945-952c-0341041304f7](/phenotypic-features/73ee2a00-02ce-4945-952c-0341041304f7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [8bd56b29-c1df-475c-b64c-a8763069139d](/phenotypic-features/8bd56b29-c1df-475c-b64c-a8763069139d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [388e6c7d-aa54-4b94-b6d4-d0096dc58b8d](/phenotypic-features/388e6c7d-aa54-4b94-b6d4-d0096dc58b8d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [68fe3a71-6fc0-47e8-834c-794714585a7e](/phenotypic-features/68fe3a71-6fc0-47e8-834c-794714585a7e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [b2b44f93-e621-43f7-80a5-3d1b73a794b2](/phenotypic-features/b2b44f93-e621-43f7-80a5-3d1b73a794b2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [08a4bc6e-1d5d-46df-92f0-6085a35a75a7](/phenotypic-features/08a4bc6e-1d5d-46df-92f0-6085a35a75a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [8442786a-d708-482c-8764-201d14e47680](/phenotypic-features/8442786a-d708-482c-8764-201d14e47680/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [e60abb08-e197-449b-8eb8-7172db9d3bac](/phenotypic-features/e60abb08-e197-449b-8eb8-7172db9d3bac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [8790c6f7-88f2-4fb1-ac9c-edba4df8ee68](/phenotypic-features/8790c6f7-88f2-4fb1-ac9c-edba4df8ee68/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [74a7866d-ae30-4c3c-87c8-e6ee465cbb92](/phenotypic-features/74a7866d-ae30-4c3c-87c8-e6ee465cbb92/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [93b9663b-8d12-4847-b578-798d6d08a5d7](/phenotypic-features/93b9663b-8d12-4847-b578-798d6d08a5d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [5cb28322-2d6b-409f-950e-f6b78c71b3c5](/phenotypic-features/5cb28322-2d6b-409f-950e-f6b78c71b3c5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [b108288d-1ef0-4234-9b6b-10c5011f2d3e](/phenotypic-features/b108288d-1ef0-4234-9b6b-10c5011f2d3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6013FYCW](/human-donors/IGVFDO6013FYCW/) has in progress subobject phenotypic feature [b205a9bf-71f0-45f4-8fe9-d3ecd7e56b67](/phenotypic-features/b205a9bf-71f0-45f4-8fe9-d3ecd7e56b67/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6013FYCW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6013FYCW](/human-donors/IGVFDO6013FYCW/) has in progress subobject phenotypic feature [1b5dfd5f-7289-4dcc-afbe-0c6e4446f22c](/phenotypic-features/1b5dfd5f-7289-4dcc-afbe-0c6e4446f22c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6013FYCW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6013FYCW](/human-donors/IGVFDO6013FYCW/) has in progress subobject phenotypic feature [61f3a82b-e754-457c-949c-01aeff12f1e1](/phenotypic-features/61f3a82b-e754-457c-949c-01aeff12f1e1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6013FYCW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6013FYCW](/human-donors/IGVFDO6013FYCW/) has in progress subobject phenotypic feature [25df185e-787e-41d8-b161-a524d1183f55](/phenotypic-features/25df185e-787e-41d8-b161-a524d1183f55/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6013FYCW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6013FYCW](/human-donors/IGVFDO6013FYCW/) has in progress subobject phenotypic feature [b1bac7dd-412a-460a-9336-044c2b41f36b](/phenotypic-features/b1bac7dd-412a-460a-9336-044c2b41f36b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6013FYCW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6013FYCW](/human-donors/IGVFDO6013FYCW/) has in progress subobject phenotypic feature [0b83aa3d-f968-4f99-9ed1-6035e64cf81d](/phenotypic-features/0b83aa3d-f968-4f99-9ed1-6035e64cf81d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6013FYCW/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS0698PXMG](/measurement-sets/IGVFDS0698PXMG/) has sequence file(s): [IGVFFI3543YUPS](/sequence-files/IGVFFI3543YUPS/), [IGVFFI8736KXGV](/sequence-files/IGVFFI8736KXGV/), [IGVFFI5284DMXP](/sequence-files/IGVFFI5284DMXP/), [IGVFFI3128TFTO](/sequence-files/IGVFFI3128TFTO/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS0698PXMG/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS0698PXMG](/measurement-sets/IGVFDS0698PXMG/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS0698PXMG/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS0698PXMG](/measurement-sets/IGVFDS0698PXMG/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS0698PXMG/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:33:06.419776+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO1278CNID/",
"accession": "IGVFDO1278CNID",
"aliases": [
"igvf:corces_donor_BANN1506"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0180JQCL/",
"accession": "IGVFDO0180JQCL",
"aliases": [
"igvf:corces_donor_BANN1344"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1997RFPJ/",
"accession": "IGVFDO1997RFPJ",
"aliases": [
"igvf:corces_donor_BANN1340"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6837RJUQ/",
"accession": "IGVFDO6837RJUQ",
"aliases": [
"igvf:corces_donor_BANN1201"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9028PIDF/",
"accession": "IGVFDO9028PIDF",
"aliases": [
"igvf:corces_donor_BANN1637"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9299YLNH/",
"accession": "IGVFDO9299YLNH",
"aliases": [
"igvf:corces_donor_BANN1921"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3628ZBBZ/",
"accession": "IGVFDO3628ZBBZ",
"aliases": [
"igvf:corces_donor_BANN0348"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6513APBX/",
"accession": "IGVFDO6513APBX",
"aliases": [
"igvf:corces_donor_BANN0210"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5228HTJC/",
"accession": "IGVFDO5228HTJC",
"aliases": [
"igvf:corces_donor_BANN1839"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6380POHE/",
"accession": "IGVFDO6380POHE",
"aliases": [
"igvf:corces_donor_BANN0124"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8344LUQZ/",
"accession": "IGVFDO8344LUQZ",
"aliases": [
"igvf:corces_donor_BANN0621"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6013FYCW/",
"accession": "IGVFDO6013FYCW",
"aliases": [
"igvf:corces_donor_BANN0912"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3543YUPS/",
"accession": "IGVFFI3543YUPS",
"aliases": [
"igvf:corces_sequenceFile_RNA_X023_G5_P022_L002_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T01:40:27.406070+00:00",
"file_format": "fastq",
"file_size": 1377632711,
"href": "/sequence-files/IGVFFI3543YUPS/@@download/IGVFFI3543YUPS.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/1411d8f2-4285-462f-8465-2d525f3403fd/IGVFFI3543YUPS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X023_G5_L005_P022_S21_L002_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8736KXGV/",
"accession": "IGVFFI8736KXGV",
"aliases": [
"igvf:corces_sequenceFile_RNA_X023_G5_P022_L002_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T01:40:31.527142+00:00",
"file_format": "fastq",
"file_size": 10498660805,
"href": "/sequence-files/IGVFFI8736KXGV/@@download/IGVFFI8736KXGV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b71baf13-dc13-4bcc-9af2-a2ec2004f6be/IGVFFI8736KXGV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X023_G5_L005_P022_S21_L002_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5284DMXP/",
"accession": "IGVFFI5284DMXP",
"aliases": [
"igvf:corces_sequenceFile_RNA_X023_G5_P022_L002_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T01:40:25.402977+00:00",
"file_format": "fastq",
"file_size": 1225843280,
"href": "/sequence-files/IGVFFI5284DMXP/@@download/IGVFFI5284DMXP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/19a714a1-3741-4bb0-84a9-3254c8d4dd32/IGVFFI5284DMXP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X023_G5_L005_P022_S21_L002_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3128TFTO/",
"accession": "IGVFFI3128TFTO",
"aliases": [
"igvf:corces_sequenceFile_RNA_X023_G5_P022_L002_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T01:40:29.386315+00:00",
"file_format": "fastq",
"file_size": 12455558918,
"href": "/sequence-files/IGVFFI3128TFTO/@@download/IGVFFI3128TFTO.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/66bcd836-a1c2-4942-96b3-a69c9777ee3f/IGVFFI3128TFTO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X023_G5_L005_P022_S21_L002_R1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS5060RPOC/",
"accession": "IGVFDS5060RPOC",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM4549GBAI/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM4549GBAI",
"aliases": [
"igvf:corces_multiplexedSample_X023_G5"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (female, 88 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 75 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T01:40:25.402977+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "747b9ee6-1651-4739-a3c5-42c7d1b91862"
}