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INDEXED
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MeasurementSet
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IGVFDS0635LULZ
IGVFDS0635LULZ
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 16 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C39_day16
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0186FKKJ
fastq
reads
R1
1
Illumina NovaSeq X
2
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI0231IWEL
fastq
reads
R2
2
Illumina NovaSeq X
2
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI0240RIJV
fastq
reads
R1
1
Illumina NovaSeq X
4
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI0296UJYX
fastq
reads
R2
2
Illumina NovaSeq X
8
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI0668MPYF
fastq
reads
R1
1
Illumina NovaSeq X
1
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI0748RFPP
fastq
reads
R2
2
Illumina NovaSeq X
7
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI1245NEGW
fastq
reads
R1
1
Illumina NovaSeq X
3
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI1330XNXA
fastq
reads
R1
1
Illumina NovaSeq X
7
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI3545BXVL
fastq
reads
R2
2
Illumina NovaSeq X
4
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI4105LPRJ
fastq
reads
R1
1
Illumina NovaSeq X
5
2.7 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM9563MBMI
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 16 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO4068JJIT
chongyuan-luo:C39
unspecified
Homo sapiens