IGVFDS0629YEMD

1{
2    "@context": "/terms/",
3    "@id": "/measurement-sets/IGVFDS0629YEMD/",
4    "@type": [
5        "MeasurementSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS0629YEMD",
10    "aliases": [
11        "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input_AmpliconSequencing"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0003661/",
15        "assay_slims": [
16            "CRISPR screens"
17        ],
18        "status": "released",
19        "term_name": "in vitro CRISPR screen using flow cytometry"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "missing publication",
25                "detail": "Measurement set [IGVFDS0629YEMD](/measurement-sets/IGVFDS0629YEMD/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_file_set_missing_publication",
29                "path": "/measurement-sets/IGVFDS0629YEMD/"
30            },
31            {
32                "category": "missing sequencing kit",
33                "detail": "Measurement set [IGVFDS0629YEMD](/measurement-sets/IGVFDS0629YEMD/) has sequence file(s) [IGVFFI0201OZPG](/sequence-files/IGVFFI0201OZPG/), [IGVFFI9597PKII](/sequence-files/IGVFFI9597PKII/), [IGVFFI6287AEUR](/sequence-files/IGVFFI6287AEUR/), [IGVFFI3762ADST](/sequence-files/IGVFFI3762ADST/), [IGVFFI2124HSYU](/sequence-files/IGVFFI2124HSYU/), [IGVFFI5022GHUD](/sequence-files/IGVFFI5022GHUD/), [IGVFFI8491NCJR](/sequence-files/IGVFFI8491NCJR/), [IGVFFI9179IONQ](/sequence-files/IGVFFI9179IONQ/), [IGVFFI9971VICM](/sequence-files/IGVFFI9971VICM/), [IGVFFI5824KSZO](/sequence-files/IGVFFI5824KSZO/), [IGVFFI9357QJYS](/sequence-files/IGVFFI9357QJYS/), [IGVFFI6469SVUU](/sequence-files/IGVFFI6469SVUU/), [IGVFFI4961ZHSS](/sequence-files/IGVFFI4961ZHSS/), [IGVFFI1144DBOQ](/sequence-files/IGVFFI1144DBOQ/), [IGVFFI8962GESX](/sequence-files/IGVFFI8962GESX/), [IGVFFI5754KELW](/sequence-files/IGVFFI5754KELW/) which lack specification of a `sequencing_kit`. Sequence files in a file set associated wtih bulk data should specify a sequencing kit.",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_inconsistent_sequencing_kit",
37                "path": "/measurement-sets/IGVFDS0629YEMD/"
38            },
39            {
40                "category": "missing sequence specification",
41                "detail": "Measurement set [IGVFDS0629YEMD](/measurement-sets/IGVFDS0629YEMD/) has sequence file(s): [IGVFFI0201OZPG](/sequence-files/IGVFFI0201OZPG/), [IGVFFI9597PKII](/sequence-files/IGVFFI9597PKII/), [IGVFFI6287AEUR](/sequence-files/IGVFFI6287AEUR/), [IGVFFI3762ADST](/sequence-files/IGVFFI3762ADST/), [IGVFFI2124HSYU](/sequence-files/IGVFFI2124HSYU/), [IGVFFI5022GHUD](/sequence-files/IGVFFI5022GHUD/), [IGVFFI8491NCJR](/sequence-files/IGVFFI8491NCJR/), [IGVFFI9179IONQ](/sequence-files/IGVFFI9179IONQ/), [IGVFFI9971VICM](/sequence-files/IGVFFI9971VICM/), [IGVFFI5824KSZO](/sequence-files/IGVFFI5824KSZO/), [IGVFFI9357QJYS](/sequence-files/IGVFFI9357QJYS/), [IGVFFI6469SVUU](/sequence-files/IGVFFI6469SVUU/), [IGVFFI4961ZHSS](/sequence-files/IGVFFI4961ZHSS/), [IGVFFI1144DBOQ](/sequence-files/IGVFFI1144DBOQ/), [IGVFFI8962GESX](/sequence-files/IGVFFI8962GESX/), [IGVFFI5754KELW](/sequence-files/IGVFFI5754KELW/) which do not have any `seqspecs`. Sequence files in a file set associated with bulk data are expected to link to a sequence specification file.",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_missing_seqspec",
45                "path": "/measurement-sets/IGVFDS0629YEMD/"
46            },
47            {
48                "category": "mismatched status",
49                "detail": "Released in vitro system [IGVFSM6276DPKS](/in-vitro-systems/IGVFSM6276DPKS/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_item_status",
53                "path": "/in-vitro-systems/IGVFSM6276DPKS/"
54            },
55            {
56                "category": "missing publication",
57                "detail": "In vitro system [IGVFSM6276DPKS](/in-vitro-systems/IGVFSM6276DPKS/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
58                "level": 30,
59                "level_name": "INTERNAL_ACTION",
60                "name": "audit_sample_missing_publication",
61                "path": "/in-vitro-systems/IGVFSM6276DPKS/"
62            }
63        ],
64        "NOT_COMPLIANT": [
65            {
66                "category": "missing control for",
67                "detail": "Measurement set [IGVFDS0629YEMD](/measurement-sets/IGVFDS0629YEMD/) has no `control_for`. The `control_file_sets` should be patched on the file sets it serves as a control for and this property, `control_for`, will be reverse calculated. File sets that specify a control type are expected to be a control for other file sets.",
68                "level": 50,
69                "level_name": "NOT_COMPLIANT",
70                "name": "audit_control_for_control_type",
71                "path": "/measurement-sets/IGVFDS0629YEMD/"
72            }
73        ],
74        "WARNING": [
75            {
76                "category": "missing auxiliary set",
77                "detail": "Measurement set [IGVFDS0629YEMD](/measurement-sets/IGVFDS0629YEMD/) has no cell sorting `auxiliary_sets`. CRISPR-based measurement sets that utilize flow cytometry are expected to link to a cell sorting auxiliary set.",
78                "level": 40,
79                "level_name": "WARNING",
80                "name": "audit_missing_auxiliary_set",
81                "path": "/measurement-sets/IGVFDS0629YEMD/"
82            },
83            {
84                "category": "missing targeted genes",
85                "detail": "Measurement set [IGVFDS0629YEMD](/measurement-sets/IGVFDS0629YEMD/) has no `targeted_genes`. ChIP-seq and CRISPR flow cytometry assays are expected to specify targeted gene(s).",
86                "level": 40,
87                "level_name": "WARNING",
88                "name": "audit_targeted_genes",
89                "path": "/measurement-sets/IGVFDS0629YEMD/"
90            }
91        ]
92    },
93    "award": {
94        "@id": "/awards/HG011972/",
95        "component": "functional characterization",
96        "contact_pi": {
97            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
98            "title": "Jesse Engreitz"
99        },
100        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
101    },
102    "construct_library_sets": [
103        {
104            "@id": "/construct-library-sets/IGVFDS6982DESN/",
105            "accession": "IGVFDS6982DESN",
106            "file_set_type": "guide library",
107            "status": "in progress",
108            "summary": "guide (sgRNA) library targeting sequence variants in a genomic locus"
109        }
110    ],
111    "control_file_sets": [
112        {
113            "@id": "/measurement-sets/IGVFDS5864UGFT/",
114            "accession": "IGVFDS5864UGFT",
115            "aliases": [
116                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-THP1-PE2_Exp2_NegControl_AmpliconSequencing"
117            ],
118            "status": "released"
119        }
120    ],
121    "control_for": [],
122    "control_type": "unsorted FACS input",
123    "creation_timestamp": "2023-11-30T22:50:09.331561+00:00",
124    "data_use_limitation_summaries": [
125        "no certificate"
126    ],
127    "donors": [
128        {
129            "@id": "/human-donors/IGVFDO7359LVPI/",
130            "accession": "IGVFDO7359LVPI",
131            "aliases": [
132                "igvf:donor_of_THP1"
133            ],
134            "sex": "male",
135            "status": "released",
136            "taxa": "Homo sapiens"
137        }
138    ],
139    "externally_hosted": false,
140    "file_set_type": "experimental data",
141    "files": [
142        {
143            "@id": "/sequence-files/IGVFFI0201OZPG/",
144            "accession": "IGVFFI0201OZPG",
145            "aliases": [
146                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep4_R1"
147            ],
148            "content_type": "reads",
149            "controlled_access": false,
150            "creation_timestamp": "2023-12-05T23:34:45.641345+00:00",
151            "file_format": "fastq",
152            "file_size": 4499130,
153            "href": "/sequence-files/IGVFFI0201OZPG/@@download/IGVFFI0201OZPG.fastq.gz",
154            "md5sum": "03e5b2b45e07d016a8f3f1b17ce595c5",
155            "s3_uri": "s3://igvf-files/2023/12/05/14c165f8-5b40-4c10-9ed1-b3e794d691d8/IGVFFI0201OZPG.fastq.gz",
156            "sequencing_platform": {
157                "@id": "/platform-terms/EFO_0008566/",
158                "status": "released",
159                "term_name": "Illumina NextSeq 550"
160            },
161            "status": "released",
162            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep4_S419_R1_001.fastq.gz",
163            "upload_status": "validated"
164        },
165        {
166            "@id": "/sequence-files/IGVFFI9597PKII/",
167            "accession": "IGVFFI9597PKII",
168            "aliases": [
169                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep4_I1"
170            ],
171            "content_type": "reads",
172            "controlled_access": false,
173            "creation_timestamp": "2023-12-05T23:34:28.402820+00:00",
174            "file_format": "fastq",
175            "file_size": 1291100,
176            "href": "/sequence-files/IGVFFI9597PKII/@@download/IGVFFI9597PKII.fastq.gz",
177            "md5sum": "78064e5dacdec969d5bec1e9d0d802de",
178            "s3_uri": "s3://igvf-files/2023/12/05/391375c2-4b83-45b3-a9c1-9070654d4941/IGVFFI9597PKII.fastq.gz",
179            "sequencing_platform": {
180                "@id": "/platform-terms/EFO_0008566/",
181                "status": "released",
182                "term_name": "Illumina NextSeq 550"
183            },
184            "status": "released",
185            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep4_S419_I1_001.fastq.gz",
186            "upload_status": "validated"
187        },
188        {
189            "@id": "/sequence-files/IGVFFI6287AEUR/",
190            "accession": "IGVFFI6287AEUR",
191            "aliases": [
192                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep1_R1"
193            ],
194            "content_type": "reads",
195            "controlled_access": false,
196            "creation_timestamp": "2023-12-05T23:33:00.864241+00:00",
197            "file_format": "fastq",
198            "file_size": 4764193,
199            "href": "/sequence-files/IGVFFI6287AEUR/@@download/IGVFFI6287AEUR.fastq.gz",
200            "md5sum": "ebb4bb5a54dd92488a3e3d95f2ef65f7",
201            "s3_uri": "s3://igvf-files/2023/12/05/e13ad3b2-9bda-42a5-8f51-31769702c3e2/IGVFFI6287AEUR.fastq.gz",
202            "sequencing_platform": {
203                "@id": "/platform-terms/EFO_0008566/",
204                "status": "released",
205                "term_name": "Illumina NextSeq 550"
206            },
207            "status": "released",
208            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep1_S392_R1_001.fastq.gz",
209            "upload_status": "validated"
210        },
211        {
212            "@id": "/sequence-files/IGVFFI3762ADST/",
213            "accession": "IGVFFI3762ADST",
214            "aliases": [
215                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep1_I1"
216            ],
217            "content_type": "reads",
218            "controlled_access": false,
219            "creation_timestamp": "2023-12-05T23:32:43.691970+00:00",
220            "file_format": "fastq",
221            "file_size": 1433112,
222            "href": "/sequence-files/IGVFFI3762ADST/@@download/IGVFFI3762ADST.fastq.gz",
223            "md5sum": "72928ae0ab254e520b29aab006103435",
224            "s3_uri": "s3://igvf-files/2023/12/05/07aacb86-aa1e-4bd5-a2bb-a6651b0f4c84/IGVFFI3762ADST.fastq.gz",
225            "sequencing_platform": {
226                "@id": "/platform-terms/EFO_0008566/",
227                "status": "released",
228                "term_name": "Illumina NextSeq 550"
229            },
230            "status": "released",
231            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep1_S392_I1_001.fastq.gz",
232            "upload_status": "validated"
233        },
234        {
235            "@id": "/sequence-files/IGVFFI2124HSYU/",
236            "accession": "IGVFFI2124HSYU",
237            "aliases": [
238                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep3_R2"
239            ],
240            "content_type": "reads",
241            "controlled_access": false,
242            "creation_timestamp": "2023-12-05T23:34:19.511690+00:00",
243            "file_format": "fastq",
244            "file_size": 6897401,
245            "href": "/sequence-files/IGVFFI2124HSYU/@@download/IGVFFI2124HSYU.fastq.gz",
246            "md5sum": "b5cb6d29aed4b81b9ff5f9bea9cc7245",
247            "s3_uri": "s3://igvf-files/2023/12/05/36e11832-879d-45b1-9bde-0f8b04bde23f/IGVFFI2124HSYU.fastq.gz",
248            "sequencing_platform": {
249                "@id": "/platform-terms/EFO_0008566/",
250                "status": "released",
251                "term_name": "Illumina NextSeq 550"
252            },
253            "status": "released",
254            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep3_S410_R2_001.fastq.gz",
255            "upload_status": "validated"
256        },
257        {
258            "@id": "/sequence-files/IGVFFI5022GHUD/",
259            "accession": "IGVFFI5022GHUD",
260            "aliases": [
261                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep3_I2"
262            ],
263            "content_type": "reads",
264            "controlled_access": false,
265            "creation_timestamp": "2023-12-05T23:34:02.052096+00:00",
266            "file_format": "fastq",
267            "file_size": 1328969,
268            "href": "/sequence-files/IGVFFI5022GHUD/@@download/IGVFFI5022GHUD.fastq.gz",
269            "md5sum": "33d3a32ed77081f6899fc351e1d4e316",
270            "s3_uri": "s3://igvf-files/2023/12/05/f870de0d-936b-4044-a3fb-ff6a86227853/IGVFFI5022GHUD.fastq.gz",
271            "sequencing_platform": {
272                "@id": "/platform-terms/EFO_0008566/",
273                "status": "released",
274                "term_name": "Illumina NextSeq 550"
275            },
276            "status": "released",
277            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep3_S410_I2_001.fastq.gz",
278            "upload_status": "validated"
279        },
280        {
281            "@id": "/sequence-files/IGVFFI8491NCJR/",
282            "accession": "IGVFFI8491NCJR",
283            "aliases": [
284                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep2_I1"
285            ],
286            "content_type": "reads",
287            "controlled_access": false,
288            "creation_timestamp": "2023-12-05T23:33:18.419384+00:00",
289            "file_format": "fastq",
290            "file_size": 1325639,
291            "href": "/sequence-files/IGVFFI8491NCJR/@@download/IGVFFI8491NCJR.fastq.gz",
292            "md5sum": "1aa01b2268bb4483c2ceae9bef64f20f",
293            "s3_uri": "s3://igvf-files/2023/12/05/90eb38d4-1752-407f-b853-2bfba362f3e1/IGVFFI8491NCJR.fastq.gz",
294            "sequencing_platform": {
295                "@id": "/platform-terms/EFO_0008566/",
296                "status": "released",
297                "term_name": "Illumina NextSeq 550"
298            },
299            "status": "released",
300            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep2_S401_I1_001.fastq.gz",
301            "upload_status": "validated"
302        },
303        {
304            "@id": "/sequence-files/IGVFFI9179IONQ/",
305            "accession": "IGVFFI9179IONQ",
306            "aliases": [
307                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep3_I1"
308            ],
309            "content_type": "reads",
310            "controlled_access": false,
311            "creation_timestamp": "2023-12-05T23:33:53.436348+00:00",
312            "file_format": "fastq",
313            "file_size": 1292153,
314            "href": "/sequence-files/IGVFFI9179IONQ/@@download/IGVFFI9179IONQ.fastq.gz",
315            "md5sum": "574ff7dee0ed4366b1491d61783e0c11",
316            "s3_uri": "s3://igvf-files/2023/12/05/5766e33f-6aaf-4eb2-9888-ab63cbfb9a5f/IGVFFI9179IONQ.fastq.gz",
317            "sequencing_platform": {
318                "@id": "/platform-terms/EFO_0008566/",
319                "status": "released",
320                "term_name": "Illumina NextSeq 550"
321            },
322            "status": "released",
323            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep3_S410_I1_001.fastq.gz",
324            "upload_status": "validated"
325        },
326        {
327            "@id": "/sequence-files/IGVFFI9971VICM/",
328            "accession": "IGVFFI9971VICM",
329            "aliases": [
330                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep1_I2"
331            ],
332            "content_type": "reads",
333            "controlled_access": false,
334            "creation_timestamp": "2023-12-05T23:32:52.277458+00:00",
335            "file_format": "fastq",
336            "file_size": 1379733,
337            "href": "/sequence-files/IGVFFI9971VICM/@@download/IGVFFI9971VICM.fastq.gz",
338            "md5sum": "6d166746a44696fcca3ba48aca14ebbe",
339            "s3_uri": "s3://igvf-files/2023/12/05/e00e45a8-acc6-4156-9b2c-ca65932be16b/IGVFFI9971VICM.fastq.gz",
340            "sequencing_platform": {
341                "@id": "/platform-terms/EFO_0008566/",
342                "status": "released",
343                "term_name": "Illumina NextSeq 550"
344            },
345            "status": "released",
346            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep1_S392_I2_001.fastq.gz",
347            "upload_status": "validated"
348        },
349        {
350            "@id": "/sequence-files/IGVFFI5824KSZO/",
351            "accession": "IGVFFI5824KSZO",
352            "aliases": [
353                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep4_R2"
354            ],
355            "content_type": "reads",
356            "controlled_access": false,
357            "creation_timestamp": "2023-12-05T23:34:54.231167+00:00",
358            "file_format": "fastq",
359            "file_size": 5615896,
360            "href": "/sequence-files/IGVFFI5824KSZO/@@download/IGVFFI5824KSZO.fastq.gz",
361            "md5sum": "6050f6d258fc24d2bebdd6c77826f315",
362            "s3_uri": "s3://igvf-files/2023/12/05/0a04013f-40fa-4e51-b604-2e9038427b94/IGVFFI5824KSZO.fastq.gz",
363            "sequencing_platform": {
364                "@id": "/platform-terms/EFO_0008566/",
365                "status": "released",
366                "term_name": "Illumina NextSeq 550"
367            },
368            "status": "released",
369            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep8-BinAll-PCRrep4_S419_R2_001.fastq.gz",
370            "upload_status": "validated"
371        },
372        {
373            "@id": "/sequence-files/IGVFFI9357QJYS/",
374            "accession": "IGVFFI9357QJYS",
375            "aliases": [
376                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep3_R1"
377            ],
378            "content_type": "reads",
379            "controlled_access": false,
380            "creation_timestamp": "2023-12-05T23:34:10.737590+00:00",
381            "file_format": "fastq",
382            "file_size": 5232739,
383            "href": "/sequence-files/IGVFFI9357QJYS/@@download/IGVFFI9357QJYS.fastq.gz",
384            "md5sum": "6b1cb7b1e53ca6e62c358f2ef4c75ca9",
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386            "sequencing_platform": {
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490            "aliases": [
491                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep2_R1"
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505            },
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509        }
510    ],
511    "input_for": [
512        "/analysis-sets/IGVFDS3423PSID/"
513    ],
514    "lab": {
515        "@id": "/labs/jesse-engreitz/",
516        "title": "Jesse Engreitz, Stanford"
517    },
518    "notes": "The readout 2e41e624-f6c7-4f0c-a07e-bc36cefdca39 was removed from this measurement set. This measurement set previously used Variant FlowFISH as a preferred_assay_title, but this enum is now removed. So it has been defaulted to Variant-EFFECTS.",
519    "preferred_assay_title": "Variant-EFFECTS",
520    "protocols": [
521        "https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1"
522    ],
523    "release_timestamp": "2023-12-20T23:06:07.283202+00:00",
524    "samples": [
525        {
526            "@id": "/in-vitro-systems/IGVFSM6276DPKS/",
527            "@type": [
528                "InVitroSystem",
529                "Biosample",
530                "Sample",
531                "Item"
532            ],
533            "accession": "IGVFSM6276DPKS",
534            "aliases": [
535                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input"
536            ],
537            "classifications": [
538                "cell line"
539            ],
540            "institutional_certificates": [],
541            "modifications": [
542                {
543                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
544                    "modality": "prime editing",
545                    "status": "released"
546                }
547            ],
548            "sample_terms": [
549                {
550                    "@id": "/sample-terms/EFO_0001253/",
551                    "@type": [
552                        "SampleTerm",
553                        "OntologyTerm",
554                        "Item"
555                    ],
556                    "aliases": [
557                        "igvf:THP-1"
558                    ],
559                    "status": "released",
560                    "summary": "THP-1",
561                    "term_name": "THP-1"
562                }
563            ],
564            "status": "released",
565            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
566            "taxa": "Homo sapiens"
567        }
568    ],
569    "schema_version": "26",
570    "status": "released",
571    "submitted_by": {
572        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
573        "title": "Michael Montgomery"
574    },
575    "submitted_files_timestamp": "2023-12-05T23:32:43.691970+00:00",
576    "summary": "unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus",
577    "uuid": "900eb589-eb3b-4cfc-81b2-9eaf7555b6b0"
578}