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IGVFDS0618QCGG

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 528)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 800
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
8353
Read 1
22V3MJLT3
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8297
Read 1
22TMH5LT3
4.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8297
Read 2, Barcode index
22TMH5LT3
7.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8353
Read 2, Barcode index
22V3MJLT3
2.6 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 528)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:772_CASTJ_10F
  • buenrostro-bernstein:Donor 2074
female
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 1546
Jason Buenrostro, Broad