{
"@context": "/terms/",
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"MeasurementSet",
"FileSet",
"Item"
],
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"chongyuan-luo:pgp_snmct_C38_day0"
],
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"multiome"
],
"status": "released",
"term_name": "single-nucleus methylcytosine and transcriptome sequencing assay"
},
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{
"category": "missing publication",
"detail": "Measurement set [IGVFDS0606THGC](/measurement-sets/IGVFDS0606THGC/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS0606THGC/"
},
{
"category": "missing sequence specification",
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"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS0606THGC/"
},
{
"category": "missing publication",
"detail": "Primary cell [IGVFSM4462WZBJ](/primary-cells/IGVFSM4462WZBJ/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/primary-cells/IGVFSM4462WZBJ/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS0606THGC](/measurement-sets/IGVFDS0606THGC/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS0606THGC/"
}
]
},
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"title": "Chongyuan Luo"
},
"title": "Leveraging genetic variation to dissect gene regulatory networks of reprogramming to pluripotency"
},
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],
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{
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}
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},
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],
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},
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],
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"href": "/sequence-files/IGVFFI5061EEFK/@@download/IGVFFI5061EEFK.fastq.gz",
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},
{
"@id": "/sequence-files/IGVFFI3901RCSM/",
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"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1123VBAK/",
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}
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"lab": {
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"title": "Chongyuan Luo, UCLA"
},
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],
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],
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}