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IGVFDS0506QTXH

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male, 29.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 17 more samples
Protocols
Aliases
jimmie-ye:XX10-SC4_snRNA
Attribution
Jimmie Ye, UCSF

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
I1
70
1.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
70
1.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
70
Read 2
9.8 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
72
1.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
71
1.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
70
Read 1
7.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
71
1.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
69
1.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
72
Read 1
7.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
69
1.2 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 29.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Donors

19 items
Aliases
  • jimmie-ye:donor_53
male
Homo sapiens
  • jimmie-ye:donor_29
male
Homo sapiens
  • jimmie-ye:donor_310
female
Homo sapiens
  • jimmie-ye:donor_192
male
Homo sapiens
  • jimmie-ye:donor_72
female
Homo sapiens
  • jimmie-ye:donor_339
female
Homo sapiens
  • jimmie-ye:donor_202
female
Homo sapiens
  • jimmie-ye:donor_67
female
Homo sapiens
  • jimmie-ye:donor_226
male
Homo sapiens
  • jimmie-ye:donor_23
male
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX10-SC4_snATAC
Jimmie Ye, UCSF