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IGVFDS0506MOGA

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 188)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 492
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
I1
8496
Barcode index
22LMVNLT4
516 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8880
Barcode index
22LMVNLT4
499 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
992
Barcode index
22773CLT3
504 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
950
Read 1
22773CLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9168
Read 1
22LMVNLT4
808 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1076
Barcode index
22773CLT3
496 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9072
Read 1
22LMVNLT4
849 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9168
Read 2
22LMVNLT4
766 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1076
Read 1
22773CLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8880
Read 1
22LMVNLT4
860 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 188)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 447
Jason Buenrostro, Broad