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IGVFDS0476WNKK

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This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 55.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Protocols
Aliases
jimmie-ye:XX13-SC1_snRNA
Attribution
Jimmie Ye, UCSF

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R2
162
Read 2
5.4 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
162
718 MB
Jimmie Ye, UCSF
validated
fastq
reads
I1
161
711 MB
Jimmie Ye, UCSF
validated
fastq
reads
R1
160
Read 1
3.9 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
160
710 MB
Jimmie Ye, UCSF
validated
fastq
reads
I2
161
713 MB
Jimmie Ye, UCSF
validated
fastq
reads
I2
162
722 MB
Jimmie Ye, UCSF
validated
fastq
reads
R1
162
Read 1
3.8 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
161
Read 2
5.4 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
160
Read 2
5.4 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 55.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Donors

20 items
Aliases
  • jimmie-ye:donor_324
female
Homo sapiens
  • jimmie-ye:donor_106
female
Homo sapiens
  • jimmie-ye:donor_95
female
Homo sapiens
  • jimmie-ye:donor_199
male
Homo sapiens
  • jimmie-ye:donor_343
female
Homo sapiens
  • jimmie-ye:donor_102
female
Homo sapiens
  • jimmie-ye:donor_296
female
Homo sapiens
  • jimmie-ye:donor_10
male
Homo sapiens
  • jimmie-ye:donor_9
male
Homo sapiens
  • jimmie-ye:donor_309
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX13-SC1_snATAC
Jimmie Ye, UCSF