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IGVFDS0457UBHV

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 208)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 605
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R1
4328
Read 1
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8907
Read 1
22LMVNLT4
432 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8619
Barcode index
22LMVNLT4
248 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8523
Read 1
22LMVNLT4
445 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4328
Barcode index
H75F7DSX5
476 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9195
Read 2
22LMVNLT4
388 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8619
Read 1
22LMVNLT4
427 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9003
Read 2
22LMVNLT4
392 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3858
Barcode index
22523KLT3
204 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8619
Read 2
22LMVNLT4
412 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 208)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 248
Jason Buenrostro, Broad