Home

IGVFDS0421VWRP

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 602)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1775
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R2
8370
Read 2, Barcode index
22V3MJLT3
5.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8370
Read 1
22V3MJLT3
3.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8380
Read 1
22V3MJLT3
3.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8390
Read 1
22V3MJLT3
3.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8390
Read 2, Barcode index
22V3MJLT3
5.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8380
Read 2, Barcode index
22V3MJLT3
5.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 602)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:773_CASTJ_10M
  • buenrostro-bernstein:Donor 2071
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 839
Jason Buenrostro, Broad