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INDEXED
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MeasurementSet
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IGVFDS0357HJRR
IGVFDS0357HJRR
released
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File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C29_day1
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0326VDZG
fastq
reads
R2
1
Illumina NovaSeq X
4
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI0873KWKS
fastq
reads
R2
1
Illumina NovaSeq X
6
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI0883GHMI
fastq
reads
R2
1
Illumina NovaSeq X
3
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI0938ZXEM
fastq
reads
R1
1
Illumina NovaSeq X
7
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI2714ZSEW
fastq
reads
R1
1
Illumina NovaSeq X
4
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI2791WXMP
fastq
reads
R1
1
Illumina NovaSeq X
1
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI4250XLUW
fastq
reads
R2
1
Illumina NovaSeq X
2
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI4737PNVI
fastq
reads
R1
1
Illumina NovaSeq X
3
2.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI4783DNSQ
fastq
reads
R2
1
Illumina NovaSeq X
5
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI5021VIRD
fastq
reads
R1
1
Illumina NovaSeq X
5
3.0 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM0122NJDW
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3754NCBP
chongyuan-luo:C29
unspecified
Homo sapiens