{
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],
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],
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{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
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"title": "Ali Mortazavi"
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"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
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],
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},
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},
{
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},
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],
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},
{
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],
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},
{
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],
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},
{
"@id": "/rodent-donors/IGVFDO9333ACQP/",
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],
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},
{
"@id": "/rodent-donors/IGVFDO3261YWHI/",
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],
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}
],
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},
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"upload_status": "validated"
},
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},
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},
{
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},
{
"@id": "/configuration-files/IGVFFI6996TJFS/",
"accession": "IGVFFI6996TJFS",
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"creation_timestamp": "2024-08-30T21:35:28.309634+00:00",
"file_format": "yaml",
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},
{
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"accession": "IGVFFI0339PWMG",
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"creation_timestamp": "2024-08-30T21:35:29.529427+00:00",
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"file_size": 1113,
"href": "/configuration-files/IGVFFI0339PWMG/@@download/IGVFFI0339PWMG.yaml.gz",
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}
],
"input_file_set_for": [
"/analysis-sets/IGVFDS8648GJCE/"
],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"notes": "Preferred_assay_titles enum Parse Split-seq has been renamed to be Parse SPLiT-seq.",
"preferred_assay_title": "Parse SPLiT-seq",
"protocols": [
"https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1",
"https://www.protocols.io/view/evercode-wt-v2-2-1-eq2lyj9relx9/v1",
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-cryopreser-4r3l22y2pl1y/v1"
],
"release_timestamp": "2024-05-08T23:38:42.238084+00:00",
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM2294BOOU/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM2294BOOU",
"aliases": [
"ali-mortazavi:subpool_b01_13h"
],
"classifications": [
"multiplexed sample"
],
"construct_library_sets": [],
"disease_terms": [],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/NTR_0000646/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left cerebral cortex",
"term_name": "left cerebral cortex"
}
],
"status": "released",
"summary": "multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples",
"treatments": []
}
],
"schema_version": "21",
"sequencing_library_types": [
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],
"status": "released",
"submitted_by": {
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"title": "Diane Trout"
},
"submitted_files_timestamp": "2023-08-26T00:58:37.880269+00:00",
"summary": "Parse SPLiT-seq",
"uuid": "644602a3-5453-4f35-9813-bc4a76fc2a43"
}