IGVFDS0336ABEV

1{
2    "@context": "/terms/",
3    "@id": "/measurement-sets/IGVFDS0336ABEV/",
4    "@type": [
5        "MeasurementSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS0336ABEV",
10    "aliases": [
11        "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input_AmpliconSequencing"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0003661/",
15        "assay_slims": [
16            "CRISPR screens"
17        ],
18        "status": "released",
19        "term_name": "in vitro CRISPR screen using flow cytometry"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "mismatched status",
25                "detail": "Released in vitro system [IGVFSM4073LMYD](/in-vitro-systems/IGVFSM4073LMYD/) has in progress subobject construct library set [IGVFDS6982DESN](/construct-library-sets/IGVFDS6982DESN/).",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_item_status",
29                "path": "/in-vitro-systems/IGVFSM4073LMYD/"
30            },
31            {
32                "category": "missing publication",
33                "detail": "In vitro system [IGVFSM4073LMYD](/in-vitro-systems/IGVFSM4073LMYD/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_sample_missing_publication",
37                "path": "/in-vitro-systems/IGVFSM4073LMYD/"
38            },
39            {
40                "category": "missing publication",
41                "detail": "Measurement set [IGVFDS0336ABEV](/measurement-sets/IGVFDS0336ABEV/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_file_set_missing_publication",
45                "path": "/measurement-sets/IGVFDS0336ABEV/"
46            },
47            {
48                "category": "missing sequencing kit",
49                "detail": "Measurement set [IGVFDS0336ABEV](/measurement-sets/IGVFDS0336ABEV/) has sequence file(s) [IGVFFI3398BSDA](/sequence-files/IGVFFI3398BSDA/), [IGVFFI1785FPJB](/sequence-files/IGVFFI1785FPJB/), [IGVFFI4247NLKQ](/sequence-files/IGVFFI4247NLKQ/), [IGVFFI9177SRUA](/sequence-files/IGVFFI9177SRUA/), [IGVFFI6791IOHK](/sequence-files/IGVFFI6791IOHK/), [IGVFFI0102KWQT](/sequence-files/IGVFFI0102KWQT/), [IGVFFI0756PLBH](/sequence-files/IGVFFI0756PLBH/), [IGVFFI0357ZBET](/sequence-files/IGVFFI0357ZBET/), [IGVFFI5413QUXZ](/sequence-files/IGVFFI5413QUXZ/), [IGVFFI7459VVTG](/sequence-files/IGVFFI7459VVTG/), [IGVFFI0123APPT](/sequence-files/IGVFFI0123APPT/), [IGVFFI6442NBDS](/sequence-files/IGVFFI6442NBDS/), [IGVFFI1501LVBT](/sequence-files/IGVFFI1501LVBT/), [IGVFFI7412LHXG](/sequence-files/IGVFFI7412LHXG/), [IGVFFI0294FTPQ](/sequence-files/IGVFFI0294FTPQ/), [IGVFFI3220SMDU](/sequence-files/IGVFFI3220SMDU/) which lack specification of a `sequencing_kit`. Sequence files in a file set associated wtih bulk data should specify a sequencing kit.",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_inconsistent_sequencing_kit",
53                "path": "/measurement-sets/IGVFDS0336ABEV/"
54            },
55            {
56                "category": "missing sequence specification",
57                "detail": "Measurement set [IGVFDS0336ABEV](/measurement-sets/IGVFDS0336ABEV/) has sequence file(s): [IGVFFI3398BSDA](/sequence-files/IGVFFI3398BSDA/), [IGVFFI1785FPJB](/sequence-files/IGVFFI1785FPJB/), [IGVFFI4247NLKQ](/sequence-files/IGVFFI4247NLKQ/), [IGVFFI9177SRUA](/sequence-files/IGVFFI9177SRUA/), [IGVFFI6791IOHK](/sequence-files/IGVFFI6791IOHK/), [IGVFFI0102KWQT](/sequence-files/IGVFFI0102KWQT/), [IGVFFI0756PLBH](/sequence-files/IGVFFI0756PLBH/), [IGVFFI0357ZBET](/sequence-files/IGVFFI0357ZBET/), [IGVFFI5413QUXZ](/sequence-files/IGVFFI5413QUXZ/), [IGVFFI7459VVTG](/sequence-files/IGVFFI7459VVTG/), [IGVFFI0123APPT](/sequence-files/IGVFFI0123APPT/), [IGVFFI6442NBDS](/sequence-files/IGVFFI6442NBDS/), [IGVFFI1501LVBT](/sequence-files/IGVFFI1501LVBT/), [IGVFFI7412LHXG](/sequence-files/IGVFFI7412LHXG/), [IGVFFI0294FTPQ](/sequence-files/IGVFFI0294FTPQ/), [IGVFFI3220SMDU](/sequence-files/IGVFFI3220SMDU/) which do not have any `seqspecs`. Sequence files in a file set associated with bulk data are expected to link to a sequence specification file.",
58                "level": 30,
59                "level_name": "INTERNAL_ACTION",
60                "name": "audit_missing_seqspec",
61                "path": "/measurement-sets/IGVFDS0336ABEV/"
62            }
63        ],
64        "NOT_COMPLIANT": [
65            {
66                "category": "missing control for",
67                "detail": "Measurement set [IGVFDS0336ABEV](/measurement-sets/IGVFDS0336ABEV/) has no `control_for`. The `control_file_sets` should be patched on the file sets it serves as a control for and this property, `control_for`, will be reverse calculated. File sets that specify a control type are expected to be a control for other file sets.",
68                "level": 50,
69                "level_name": "NOT_COMPLIANT",
70                "name": "audit_control_for_control_type",
71                "path": "/measurement-sets/IGVFDS0336ABEV/"
72            }
73        ],
74        "WARNING": [
75            {
76                "category": "missing auxiliary set",
77                "detail": "Measurement set [IGVFDS0336ABEV](/measurement-sets/IGVFDS0336ABEV/) has no cell sorting `auxiliary_sets`. CRISPR-based measurement sets that utilize flow cytometry are expected to link to a cell sorting auxiliary set.",
78                "level": 40,
79                "level_name": "WARNING",
80                "name": "audit_missing_auxiliary_set",
81                "path": "/measurement-sets/IGVFDS0336ABEV/"
82            },
83            {
84                "category": "missing targeted genes",
85                "detail": "Measurement set [IGVFDS0336ABEV](/measurement-sets/IGVFDS0336ABEV/) has no `targeted_genes`. ChIP-seq and CRISPR flow cytometry assays are expected to specify targeted gene(s).",
86                "level": 40,
87                "level_name": "WARNING",
88                "name": "audit_targeted_genes",
89                "path": "/measurement-sets/IGVFDS0336ABEV/"
90            }
91        ]
92    },
93    "award": {
94        "@id": "/awards/HG011972/",
95        "component": "functional characterization",
96        "contact_pi": {
97            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
98            "title": "Jesse Engreitz"
99        },
100        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
101    },
102    "construct_library_sets": [
103        {
104            "@id": "/construct-library-sets/IGVFDS6982DESN/",
105            "accession": "IGVFDS6982DESN",
106            "file_set_type": "guide library",
107            "status": "in progress",
108            "summary": "guide (sgRNA) library targeting sequence variants in a genomic locus"
109        }
110    ],
111    "control_file_sets": [
112        {
113            "@id": "/measurement-sets/IGVFDS5864UGFT/",
114            "accession": "IGVFDS5864UGFT",
115            "aliases": [
116                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-THP1-PE2_Exp2_NegControl_AmpliconSequencing"
117            ],
118            "status": "released"
119        }
120    ],
121    "control_for": [],
122    "control_type": "unsorted FACS input",
123    "creation_timestamp": "2023-11-30T22:49:48.041759+00:00",
124    "data_use_limitation_summaries": [
125        "no certificate"
126    ],
127    "donors": [
128        {
129            "@id": "/human-donors/IGVFDO7359LVPI/",
130            "accession": "IGVFDO7359LVPI",
131            "aliases": [
132                "igvf:donor_of_THP1"
133            ],
134            "sex": "male",
135            "status": "released",
136            "taxa": "Homo sapiens"
137        }
138    ],
139    "externally_hosted": false,
140    "file_set_type": "experimental data",
141    "files": [
142        {
143            "@id": "/sequence-files/IGVFFI3398BSDA/",
144            "accession": "IGVFFI3398BSDA",
145            "aliases": [
146                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep4_I2"
147            ],
148            "content_type": "reads",
149            "controlled_access": false,
150            "creation_timestamp": "2023-12-05T21:09:26.133535+00:00",
151            "file_format": "fastq",
152            "file_size": 1311038,
153            "href": "/sequence-files/IGVFFI3398BSDA/@@download/IGVFFI3398BSDA.fastq.gz",
154            "md5sum": "2e385a71f04cccefca9c287e0caafd85",
155            "s3_uri": "s3://igvf-files/2023/12/05/8b64e915-c869-4f56-b329-48492dbb0663/IGVFFI3398BSDA.fastq.gz",
156            "sequencing_platform": {
157                "@id": "/platform-terms/EFO_0008566/",
158                "status": "released",
159                "term_name": "Illumina NextSeq 550"
160            },
161            "status": "released",
162            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep4_S415_I2_001.fastq.gz",
163            "upload_status": "validated"
164        },
165        {
166            "@id": "/sequence-files/IGVFFI1785FPJB/",
167            "accession": "IGVFFI1785FPJB",
168            "aliases": [
169                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep1_I2"
170            ],
171            "content_type": "reads",
172            "controlled_access": false,
173            "creation_timestamp": "2023-12-05T21:07:40.638220+00:00",
174            "file_format": "fastq",
175            "file_size": 1466994,
176            "href": "/sequence-files/IGVFFI1785FPJB/@@download/IGVFFI1785FPJB.fastq.gz",
177            "md5sum": "69ff183df524251972786171b011b1bc",
178            "s3_uri": "s3://igvf-files/2023/12/05/800719a3-36d3-43bc-8d88-432e1e4357b0/IGVFFI1785FPJB.fastq.gz",
179            "sequencing_platform": {
180                "@id": "/platform-terms/EFO_0008566/",
181                "status": "released",
182                "term_name": "Illumina NextSeq 550"
183            },
184            "status": "released",
185            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep1_S388_I2_001.fastq.gz",
186            "upload_status": "validated"
187        },
188        {
189            "@id": "/sequence-files/IGVFFI4247NLKQ/",
190            "accession": "IGVFFI4247NLKQ",
191            "aliases": [
192                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep4_I1"
193            ],
194            "content_type": "reads",
195            "controlled_access": false,
196            "creation_timestamp": "2023-12-05T21:09:17.373049+00:00",
197            "file_format": "fastq",
198            "file_size": 1294316,
199            "href": "/sequence-files/IGVFFI4247NLKQ/@@download/IGVFFI4247NLKQ.fastq.gz",
200            "md5sum": "aa8a8dbebb2fe153e15762541a27aac1",
201            "s3_uri": "s3://igvf-files/2023/12/05/1808c921-f9b4-4f8c-9f9a-7b47e157603b/IGVFFI4247NLKQ.fastq.gz",
202            "sequencing_platform": {
203                "@id": "/platform-terms/EFO_0008566/",
204                "status": "released",
205                "term_name": "Illumina NextSeq 550"
206            },
207            "status": "released",
208            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep4_S415_I1_001.fastq.gz",
209            "upload_status": "validated"
210        },
211        {
212            "@id": "/sequence-files/IGVFFI9177SRUA/",
213            "accession": "IGVFFI9177SRUA",
214            "aliases": [
215                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep1_I1"
216            ],
217            "content_type": "reads",
218            "controlled_access": false,
219            "creation_timestamp": "2023-12-05T21:07:31.994284+00:00",
220            "file_format": "fastq",
221            "file_size": 1508375,
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223            "md5sum": "a8bde2871387a855e92ef632dd2518d7",
224            "s3_uri": "s3://igvf-files/2023/12/05/353a932d-6402-43ad-983a-084e74d751dc/IGVFFI9177SRUA.fastq.gz",
225            "sequencing_platform": {
226                "@id": "/platform-terms/EFO_0008566/",
227                "status": "released",
228                "term_name": "Illumina NextSeq 550"
229            },
230            "status": "released",
231            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep1_S388_I1_001.fastq.gz",
232            "upload_status": "validated"
233        },
234        {
235            "@id": "/sequence-files/IGVFFI6791IOHK/",
236            "accession": "IGVFFI6791IOHK",
237            "aliases": [
238                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep2_I1"
239            ],
240            "content_type": "reads",
241            "controlled_access": false,
242            "creation_timestamp": "2023-12-05T21:08:06.783598+00:00",
243            "file_format": "fastq",
244            "file_size": 1336677,
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246            "md5sum": "3f9767f8ad42da03a77a92e45161fb27",
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248            "sequencing_platform": {
249                "@id": "/platform-terms/EFO_0008566/",
250                "status": "released",
251                "term_name": "Illumina NextSeq 550"
252            },
253            "status": "released",
254            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep2_S397_I1_001.fastq.gz",
255            "upload_status": "validated"
256        },
257        {
258            "@id": "/sequence-files/IGVFFI0102KWQT/",
259            "accession": "IGVFFI0102KWQT",
260            "aliases": [
261                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep2_I2"
262            ],
263            "content_type": "reads",
264            "controlled_access": false,
265            "creation_timestamp": "2023-12-05T21:08:15.534078+00:00",
266            "file_format": "fastq",
267            "file_size": 1332343,
268            "href": "/sequence-files/IGVFFI0102KWQT/@@download/IGVFFI0102KWQT.fastq.gz",
269            "md5sum": "1bd4ab1d838643b178c91794e3b1049f",
270            "s3_uri": "s3://igvf-files/2023/12/05/324e583c-d3f8-4e84-80e8-3fdb6c8bb0a3/IGVFFI0102KWQT.fastq.gz",
271            "sequencing_platform": {
272                "@id": "/platform-terms/EFO_0008566/",
273                "status": "released",
274                "term_name": "Illumina NextSeq 550"
275            },
276            "status": "released",
277            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep2_S397_I2_001.fastq.gz",
278            "upload_status": "validated"
279        },
280        {
281            "@id": "/sequence-files/IGVFFI0756PLBH/",
282            "accession": "IGVFFI0756PLBH",
283            "aliases": [
284                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep3_R1"
285            ],
286            "content_type": "reads",
287            "controlled_access": false,
288            "creation_timestamp": "2023-12-05T21:08:59.676523+00:00",
289            "file_format": "fastq",
290            "file_size": 4910065,
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292            "md5sum": "c9afdf0acb450a552f7b583b3339f35b",
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294            "sequencing_platform": {
295                "@id": "/platform-terms/EFO_0008566/",
296                "status": "released",
297                "term_name": "Illumina NextSeq 550"
298            },
299            "status": "released",
300            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep3_S406_R1_001.fastq.gz",
301            "upload_status": "validated"
302        },
303        {
304            "@id": "/sequence-files/IGVFFI0357ZBET/",
305            "accession": "IGVFFI0357ZBET",
306            "aliases": [
307                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep2_R2"
308            ],
309            "content_type": "reads",
310            "controlled_access": false,
311            "creation_timestamp": "2023-12-05T21:08:33.238872+00:00",
312            "file_format": "fastq",
313            "file_size": 5758800,
314            "href": "/sequence-files/IGVFFI0357ZBET/@@download/IGVFFI0357ZBET.fastq.gz",
315            "md5sum": "e7b405c8a5cb54fc6e86dc6eb7b343cb",
316            "s3_uri": "s3://igvf-files/2023/12/05/a045e3c7-2608-49c7-a1d1-8666a2c7f54a/IGVFFI0357ZBET.fastq.gz",
317            "sequencing_platform": {
318                "@id": "/platform-terms/EFO_0008566/",
319                "status": "released",
320                "term_name": "Illumina NextSeq 550"
321            },
322            "status": "released",
323            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep2_S397_R2_001.fastq.gz",
324            "upload_status": "validated"
325        },
326        {
327            "@id": "/sequence-files/IGVFFI5413QUXZ/",
328            "accession": "IGVFFI5413QUXZ",
329            "aliases": [
330                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep3_I2"
331            ],
332            "content_type": "reads",
333            "controlled_access": false,
334            "creation_timestamp": "2023-12-05T21:08:50.915909+00:00",
335            "file_format": "fastq",
336            "file_size": 1378898,
337            "href": "/sequence-files/IGVFFI5413QUXZ/@@download/IGVFFI5413QUXZ.fastq.gz",
338            "md5sum": "bced1d9072dfe43b27868424e13a80c7",
339            "s3_uri": "s3://igvf-files/2023/12/05/2ab6f289-4b59-4d5d-8064-76bc4018a6c8/IGVFFI5413QUXZ.fastq.gz",
340            "sequencing_platform": {
341                "@id": "/platform-terms/EFO_0008566/",
342                "status": "released",
343                "term_name": "Illumina NextSeq 550"
344            },
345            "status": "released",
346            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep3_S406_I2_001.fastq.gz",
347            "upload_status": "validated"
348        },
349        {
350            "@id": "/sequence-files/IGVFFI7459VVTG/",
351            "accession": "IGVFFI7459VVTG",
352            "aliases": [
353                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep1_R1"
354            ],
355            "content_type": "reads",
356            "controlled_access": false,
357            "creation_timestamp": "2023-12-05T21:07:49.395117+00:00",
358            "file_format": "fastq",
359            "file_size": 5255192,
360            "href": "/sequence-files/IGVFFI7459VVTG/@@download/IGVFFI7459VVTG.fastq.gz",
361            "md5sum": "b40793750d1fe3dad40b5e549c0a0324",
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363            "sequencing_platform": {
364                "@id": "/platform-terms/EFO_0008566/",
365                "status": "released",
366                "term_name": "Illumina NextSeq 550"
367            },
368            "status": "released",
369            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep1_S388_R1_001.fastq.gz",
370            "upload_status": "validated"
371        },
372        {
373            "@id": "/sequence-files/IGVFFI0123APPT/",
374            "accession": "IGVFFI0123APPT",
375            "aliases": [
376                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep2_R1"
377            ],
378            "content_type": "reads",
379            "controlled_access": false,
380            "creation_timestamp": "2023-12-05T21:08:24.386653+00:00",
381            "file_format": "fastq",
382            "file_size": 4602499,
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384            "md5sum": "7dd302c18ce8c2f82299e59a50478e97",
385            "s3_uri": "s3://igvf-files/2023/12/05/c908b977-74aa-48ed-8878-b56a238737c5/IGVFFI0123APPT.fastq.gz",
386            "sequencing_platform": {
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463        },
464        {
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466            "accession": "IGVFFI0294FTPQ",
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482            },
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486        },
487        {
488            "@id": "/sequence-files/IGVFFI3220SMDU/",
489            "accession": "IGVFFI3220SMDU",
490            "aliases": [
491                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input-PCRrep4_R2"
492            ],
493            "content_type": "reads",
494            "controlled_access": false,
495            "creation_timestamp": "2023-12-05T21:09:43.502223+00:00",
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501            "sequencing_platform": {
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504                "term_name": "Illumina NextSeq 550"
505            },
506            "status": "released",
507            "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-BinAll-PCRrep4_S415_R2_001.fastq.gz",
508            "upload_status": "validated"
509        }
510    ],
511    "input_for": [
512        "/analysis-sets/IGVFDS3423PSID/"
513    ],
514    "lab": {
515        "@id": "/labs/jesse-engreitz/",
516        "title": "Jesse Engreitz, Stanford"
517    },
518    "notes": "The readout 2e41e624-f6c7-4f0c-a07e-bc36cefdca39 was removed from this measurement set. This measurement set previously used Variant FlowFISH as a preferred_assay_title, but this enum is now removed. So it has been defaulted to Variant-EFFECTS.",
519    "preferred_assay_title": "Variant-EFFECTS",
520    "protocols": [
521        "https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1"
522    ],
523    "release_timestamp": "2023-12-20T23:06:35.809211+00:00",
524    "samples": [
525        {
526            "@id": "/in-vitro-systems/IGVFSM4073LMYD/",
527            "@type": [
528                "InVitroSystem",
529                "Biosample",
530                "Sample",
531                "Item"
532            ],
533            "accession": "IGVFSM4073LMYD",
534            "aliases": [
535                "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep4-FACS_Input"
536            ],
537            "classifications": [
538                "cell line"
539            ],
540            "institutional_certificates": [],
541            "modifications": [
542                {
543                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
544                    "modality": "prime editing",
545                    "status": "released"
546                }
547            ],
548            "sample_terms": [
549                {
550                    "@id": "/sample-terms/EFO_0001253/",
551                    "@type": [
552                        "SampleTerm",
553                        "OntologyTerm",
554                        "Item"
555                    ],
556                    "aliases": [
557                        "igvf:THP-1"
558                    ],
559                    "status": "released",
560                    "summary": "THP-1",
561                    "term_name": "THP-1"
562                }
563            ],
564            "status": "released",
565            "summary": "Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library",
566            "taxa": "Homo sapiens"
567        }
568    ],
569    "schema_version": "26",
570    "status": "released",
571    "submitted_by": {
572        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
573        "title": "Michael Montgomery"
574    },
575    "submitted_files_timestamp": "2023-12-05T21:07:31.994284+00:00",
576    "summary": "unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus",
577    "uuid": "088506d7-cbd3-49f1-8078-1526cf66a01f"
578}