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IGVFDS0313KPRX

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 797
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
7399
Read 1
22KFLYLT3
8.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
7393
Read 1
22KFLYLT3
8.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
7393
Read 2, Barcode index
22KFLYLT3
15 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
7399
Read 2, Barcode index
22KFLYLT3
15 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 502)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:777_CASTJ_10M
  • buenrostro-bernstein:Donor 2073
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 1481
Jason Buenrostro, Broad