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IGVFDS0264CFFS

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 15
buenrostro-bernstein:scRNA Lib 15

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1596
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2266
455 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2362
456 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2554
938 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1692
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1596
2.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2458
949 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1500
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2554
446 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1404
1.1 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 15
  • buenrostro-bernstein:scATAC Lib 15
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad