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IGVFDS0217CJQJ

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 53.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Protocols
Aliases
jimmie-ye:XX3-SC2_snRNA
Attribution
Jimmie Ye, UCSF

Sequencing Results (Illumina)

12 items
Read Names
fastq
reads
R2
390
Read 2
8.8 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
389
1.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
391
1.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
389
Read 1
6.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
389
1.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
390
Read 1
5.9 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
391
1.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
391
Read 2
8.0 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
391
Read 1
5.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
390
1.2 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 53.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Donors

20 items
Aliases
  • jimmie-ye:donor_164
male
Homo sapiens
  • jimmie-ye:donor_232
female
Homo sapiens
  • jimmie-ye:donor_223
female
Homo sapiens
  • jimmie-ye:donor_31
female
Homo sapiens
  • jimmie-ye:donor_48
female
Homo sapiens
  • jimmie-ye:donor_46
male
Homo sapiens
  • jimmie-ye:donor_316
female
Homo sapiens
  • jimmie-ye:donor_32
female
Homo sapiens
  • jimmie-ye:donor_245
female
Homo sapiens
  • jimmie-ye:donor_273
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX3-SC2_snATAC
Jimmie Ye, UCSF