Home

IGVFDS0100YDQO

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 167)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 365
Submitter Comment
Does not have corresponding scRNA seq MeasurementSet due to failed QC
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
I1
8525
Barcode index
22LMVNLT4
265 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9101
Barcode index
22LMVNLT4
251 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9005
Barcode index
22LMVNLT4
262 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8909
Read 2
22LMVNLT4
419 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9101
Read 1
22LMVNLT4
433 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
817
Barcode index
22773CLT3
859 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8717
Read 1
22LMVNLT4
461 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8813
Read 2
22LMVNLT4
447 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8909
Barcode index
22LMVNLT4
253 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8621
Barcode index
22LMVNLT4
269 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 167)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens