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IGVFDS0079JXLN

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 173)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 406
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
I1
9118
Barcode index
22LMVNLT4
331 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8542
Barcode index
22LMVNLT4
349 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8734
Barcode index
22LMVNLT4
350 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9022
Barcode index
22LMVNLT4
346 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4079
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8734
Read 1
22LMVNLT4
598 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9118
Read 2
22LMVNLT4
538 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8638
Read 1
22LMVNLT4
602 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8542
Read 2
22LMVNLT4
574 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4043
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 173)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 361
Jason Buenrostro, Broad