Home

IGVFDS0046VSEC

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 168)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 376
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R2
4263
Read 2
22523KLT3
773 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4316
Read 2
H75F7DSX5
2.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4263
Barcode index
22523KLT3
672 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4316
Read 1
H75F7DSX5
5.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4263
Read 1
22523KLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4316
Barcode index
H75F7DSX5
2.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 168)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 355
Jason Buenrostro, Broad