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IGVFDS0026GUHT

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 802
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
8299
Read 1
22TMH5LT3
6.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8355
Read 1
22V3MJLT3
3.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8355
Read 2, Barcode index
22V3MJLT3
5.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8299
Read 2, Barcode index
22TMH5LT3
12 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:772_CASTJ_10F
  • buenrostro-bernstein:Donor 2074
female
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 1550
Jason Buenrostro, Broad