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IGVFDS0020LQRY

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)
Protocols
Aliases
bradley-bernstein:scATAC Lib 111
buenrostro-bernstein:scATAC Lib 111
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
41
Read 2, Barcode index
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
241
Read 2, Barcode index
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
41
Read 1
641 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
241
Read 1
639 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1503
  • buenrostro-bernstein:Donor 1503
female
Mus musculus

Related Multiome Datasets

5 items
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 109
  • buenrostro-bernstein:scATAC Lib 109
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 110
  • buenrostro-bernstein:scATAC Lib 110
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 72
  • buenrostro-bernstein:scRNA Lib 72
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 71
  • buenrostro-bernstein:scRNA Lib 71
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 70
  • buenrostro-bernstein:scRNA Lib 70
Jason Buenrostro, Broad