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IGVFFI9795MDBY

released
validated
File Set
IGVFDS3232NVVG(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
cell by gene in raw feature barcode matrix
Analysis Step Version
/analysis-step-versions/072beaf9-db5c-4bb3-9d63-e5cf7ee29dd6/
File Format
hdf5
Content Type
raw feature barcode matrix
Content Summary
cell by gene in raw feature barcode matrix
Aliases
ansuman-satpathy:igvf6_raw_rna_counts_10x4
md5sum
f47384799d375d390824e650c831c2a5
File Size
148 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf6/e6l4_raw_feature_bc_matrix.h5
Checkfiles Version
v14

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Raw RNA count matrix definition for 10x multiome
file format specification

Samples

4 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
MultiplexedSample
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
MultiplexedSample
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
MultiplexedSample
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples

Files This File Derives From

12 items
fastq
reads
Ansuman Satpathy, Stanford
1.1 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.1 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
10.0 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
9.9 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.5 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.5 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.5 GB
validated

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Ansuman Satpathy, Stanford