IGVFFI9287XJLK

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11        "ansuman-satpathy:igvf9_raw_rna_counts_10x3"
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13    "analysis_step_version": "/analysis-step-versions/072beaf9-db5c-4bb3-9d63-e5cf7ee29dd6/",
14    "assay_titles": [
15        "10x multiome with MULTI-seq"
16    ],
17    "audit": {},
18    "award": {
19        "@id": "/awards/HG011972/",
20        "component": "functional characterization"
21    },
22    "checkfiles_version": "v14",
23    "content_summary": "cell by gene in raw feature barcode matrix",
24    "content_type": "raw feature barcode matrix",
25    "creation_timestamp": "2025-01-28T15:38:08.770663+00:00",
26    "derived_from": [
27        "/sequence-files/IGVFFI5545CAGM/",
28        "/sequence-files/IGVFFI9142ODTA/",
29        "/sequence-files/IGVFFI1352MGGZ/",
30        "/sequence-files/IGVFFI6941CWPY/",
31        "/sequence-files/IGVFFI1792CASC/",
32        "/sequence-files/IGVFFI4428CCJB/",
33        "/sequence-files/IGVFFI2960FQGR/",
34        "/sequence-files/IGVFFI0231URYL/",
35        "/sequence-files/IGVFFI4672XWHL/",
36        "/sequence-files/IGVFFI3271SBSH/",
37        "/sequence-files/IGVFFI5142TSAZ/",
38        "/sequence-files/IGVFFI5099VAJU/"
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45            "description": "Raw RNA count matrix definition for 10x multiome"
46        }
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75                "modifications": [],
76                "sample_terms": [
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78                        "@id": "/sample-terms/CL_0000236/",
79                        "status": "released",
80                        "term_name": "B cell"
81                    }
82                ],
83                "status": "released",
84                "summary": "multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples",
85                "taxa": "Homo sapiens",
86                "treatments": []
87            }
88        ],
89        "status": "released",
90        "summary": "single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)"
91    },
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96    "integrated_in": [],
97    "lab": {
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99        "title": "Ansuman Satpathy, Stanford"
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103    "principal_dimension": "cell",
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109    "release_timestamp": "2025-03-22T00:42:55.180621+00:00",
110    "s3_uri": "s3://igvf-files/2025/01/28/39c79548-7169-4c92-9c82-1374cb0ea830/IGVFFI9287XJLK.h5",
111    "schema_version": "9",
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115    "status": "released",
116    "submitted_by": {
117        "@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
118        "title": "Christopher Mcginnis"
119    },
120    "submitted_file_name": "/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf9/e9l3_raw_feature_bc_matrix.h5",
121    "summary": "cell by gene in raw feature barcode matrix",
122    "upload_status": "validated",
123    "uuid": "39c79548-7169-4c92-9c82-1374cb0ea830",
124    "workflow": {
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126        "name": "Satpathy Cell Ranger",
127        "uniform_pipeline": false
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129}