Home

IGVFFI8179MGZN

released
validated
File Set
IGVFDS2343KBHX(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
cell by gene in raw feature barcode matrix
Analysis Step Version
/analysis-step-versions/072beaf9-db5c-4bb3-9d63-e5cf7ee29dd6/
File Format
hdf5
Content Type
raw feature barcode matrix
Content Summary
cell by gene in raw feature barcode matrix
Aliases
ansuman-satpathy:igvf11_raw_rna_counts_10x2
md5sum
63b51bf7d99a6d40f1110d60339f5aa7
File Size
214 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf11/e11l2_raw_feature_bc_matrix.h5
Checkfiles Version
v14
Attribution
Ansuman Satpathy, Stanford

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Raw RNA count matrix definition for 10x multiome
file format specification

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) H7-hESC differentiated cell specimen; Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days; ... and 10 more samples

Files This File Derives From

8 items
fastq
reads
Ansuman Satpathy, Stanford
4.0 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
36 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
31 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
35 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
3.2 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
3.9 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
31 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
3.2 GB
validated