{
"@context": "/terms/",
"@id": "/matrix-files/IGVFFI8173KPQX/",
"@type": [
"MatrixFile",
"File",
"Item"
],
"accession": "IGVFFI8173KPQX",
"analysis_step_version": "/analysis-step-versions/7575fac5-2297-495f-ad92-000d9acf05f6/",
"assay_titles": [
"Parse SPLiT-seq"
],
"audit": {},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping"
},
"checkfiles_version": "v20",
"content_md5sum": "52f7152381a9a23c1f6b3da21c8be6c6",
"content_summary": "cell by gene in sparse gene count matrix",
"content_type": "sparse gene count matrix",
"creation_timestamp": "2025-04-06T22:57:13.359217+00:00",
"derived_from": [
"/sequence-files/IGVFFI0525EIJN/",
"/sequence-files/IGVFFI0002WGFW/",
"/sequence-files/IGVFFI2648WTAI/",
"/sequence-files/IGVFFI1478MAUG/",
"/sequence-files/IGVFFI5883NUWN/",
"/sequence-files/IGVFFI9392XJVT/",
"/sequence-files/IGVFFI6440EIJG/",
"/sequence-files/IGVFFI5360GVGZ/",
"/sequence-files/IGVFFI9988ZQEV/",
"/sequence-files/IGVFFI3906ONJL/",
"/sequence-files/IGVFFI4314KZOW/",
"/sequence-files/IGVFFI2567ZUJO/",
"/sequence-files/IGVFFI1422OUJI/",
"/sequence-files/IGVFFI7124FWES/",
"/sequence-files/IGVFFI4944EADG/",
"/sequence-files/IGVFFI7913RBDD/"
],
"file_format": "tar",
"file_format_specifications": [
"/documents/2cee36ca-8fc9-4918-8138-4f98384ee19a/"
],
"file_set": {
"@id": "/analysis-sets/IGVFDS8275JADG/",
"@type": [
"AnalysisSet",
"FileSet",
"Item"
],
"accession": "IGVFDS8275JADG",
"file_set_type": "intermediate analysis",
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM2096VJSO/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM2096VJSO",
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0002113/",
"status": "released",
"term_name": "kidney"
},
{
"@id": "/sample-terms/UBERON_0002369/",
"status": "released",
"term_name": "adrenal gland"
}
],
"status": "released",
"summary": "multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples",
"taxa": "Mus musculus",
"treatments": []
}
],
"status": "released",
"summary": "Parse SPLiT-seq: sparse gene count matrix"
},
"file_size": 1461718768,
"gene_list_for": [],
"href": "/matrix-files/IGVFFI8173KPQX/@@download/IGVFFI8173KPQX.tar.gz",
"input_file_for": [
"/matrix-files/IGVFFI5074IKKL/",
"/matrix-files/IGVFFI8534GAEL/"
],
"integrated_in": [],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"loci_list_for": [],
"md5sum": "2eba130b207de915326cdb418733f9ee",
"principal_dimension": "cell",
"quality_metrics": [
"/single-cell-rna-seq-quality-metrics/39a589fa-ddca-44c2-93a6-3286519935e9/"
],
"reference_files": [
"/reference-files/IGVFFI9282QLXO/",
"/reference-files/IGVFFI9744VSJF/"
],
"release_timestamp": "2025-04-19T04:04:25.390441+00:00",
"s3_uri": "s3://igvf-files/2025/04/06/5bc0d29b-c75d-4dc4-a40b-25577d167514/IGVFFI8173KPQX.tar.gz",
"schema_version": "7",
"secondary_dimensions": [
"gene"
],
"status": "released",
"submitted_by": {
"@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
"title": "Diane Trout"
},
"submitted_file_name": "igvf_009/igvf_009_Subpool_9_total+core.tar.gz",
"summary": "cell by gene in sparse gene count matrix",
"upload_status": "validated",
"uuid": "5bc0d29b-c75d-4dc4-a40b-25577d167514",
"workflow": {
"@id": "/workflows/IGVFWF6241JYDF/",
"name": "UCI snRNA-seq workflow"
}
}