IGVFFI8111GDGE

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9192YMGI(interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix)

Summary

cell by CRISPR guide capture in raw feature barcode matrix

Analysis Step Version

/analysis-step-versions/65c095ee-8330-48d0-bc03-d930326fe393/

File Format

pkl

Content Type

raw feature barcode matrix

Content Summary

cell by CRISPR guide capture in raw feature barcode matrix

Aliases

gary-hon:CM_Pilot_2_PB_RNA_pkl

md5sum

725d637642abf9488d79bc4d893af145

File Size

4.5 GB

Submitted File Name

/project/GCRB/Hon_lab/s215194/Single_Cell/Process_scRNA_CMPILOT2/pipeline_reprocessing/_all_lanes_combined/aggr_dataframe/aggr_combined_df_full.pkl

Matrix Details

Principal Dimension

cell

Secondary Dimensions

CRISPR guide capture

Samples

8 items

Sample Terms

Summary

IGVFSM2329UXLZ

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW267), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM2930BIPX

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW265), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM4953FLXN

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW262), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM5652SBGF

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW266), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM7740VKXC

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW261), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM8137TZJW

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW264), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM9326DRHX

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW268), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM9371INZC

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW263), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library