IGVFFI7871XDSP

released
validated
File Set
IGVFDS8508LTFL(Parse SPLiT-seq)
Summary
cell by gene in sparse gene count matrix
Analysis Step Version
File Format
tar
Content Type
sparse gene count matrix
Content Summary
cell by gene in sparse gene count matrix
md5sum
24e8177489b5ed35fa5d33e98d463ee8
Content MD5sum
e90ce978069e097436c8ba6ce246be1a
File Size
1.5 GB
Submitted File Name
igvf_004/igvf_004_Subpool_10_total+core.tar.gz
Checkfiles Version
Attribution

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

Reference Files

2 items
fasta
genome reference
GRCm39 genome reference
External Lab, Community
871 MB
validated
gtf
transcriptome reference
GRCm39 GENCODE M32 transcriptome reference
External Lab, Community
29 MB
validated

Files This File Derives From

16 items
fastq
reads
Ali Mortazavi, UCI
5.8 GB
validated
fastq
reads
Ali Mortazavi, UCI
5.8 GB
validated
fastq
reads
Ali Mortazavi, UCI
5.8 GB
validated
fastq
reads
Ali Mortazavi, UCI
11 GB
validated
fastq
reads
Ali Mortazavi, UCI
5.8 GB
validated
fastq
reads
Ali Mortazavi, UCI
12 GB
validated
fastq
reads
Ali Mortazavi, UCI
5.8 GB
validated
fastq
reads
Ali Mortazavi, UCI
5.8 GB
validated
fastq
reads
Ali Mortazavi, UCI
12 GB
validated
fastq
reads
Ali Mortazavi, UCI
11 GB
validated

Files Derived From This File

2 items
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
54 GB
validated
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
23 GB
validated