IGVFFI6583WSWL

released

validated

File Set

IGVFDS7388FOPN(single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))

Summary

cell by gene in raw feature barcode matrix

Analysis Step Version

/analysis-step-versions/072beaf9-db5c-4bb3-9d63-e5cf7ee29dd6/

File Format

hdf5

Content Type

raw feature barcode matrix

Content Summary

cell by gene in raw feature barcode matrix

Aliases

ansuman-satpathy:igvf16_raw_rna_counts_10x1

md5sum

6c16bb4fd7289193a4e65e8b524aaf48

File Size

242 MB

Submitted File Name

/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf16/e16l1_raw_feature_bc_matrix.h5

Checkfiles Version

v14

Attribution

Ansuman Satpathy, Stanford

(

HG011972 — Jesse Engreitz

)

Matrix Details

Principal Dimension

cell

Secondary Dimensions

gene

File Format Specifications

1 item

Page

Description

Type

Download

Standardized File Format

Preview

Raw RNA count matrix definition for 10x multiome

file format specification

raw_rna_count_marix_format.pdf

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3549KFGD

MultiplexedSample

induced pluripotent stem cell

multiplexed sample: Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 11 days; Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 3 days; ... and 6 more samples