IGVFFI5965MEPA

released
validated
File Set
IGVFDS9825AFPQ(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
cell by gene in raw feature barcode matrix
Analysis Step Version
File Format
hdf5
Content Type
raw feature barcode matrix
Content Summary
cell by gene in raw feature barcode matrix
Aliases
ansuman-satpathy:igvf16_raw_rna_counts_10x3
md5sum
77b38c1056d1d70a99036efa9d3205df
File Size
216 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf16/e16l3_raw_feature_bc_matrix.h5
Checkfiles Version

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Raw RNA count matrix definition for 10x multiome
file format specification

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 11 days; Homo sapiens (mixed sex) induced pluripotent stem differentiated cell specimen induced to islet of Langerhans for 3 days; ... and 6 more samples

Files This File Derives From

16 items
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
9.7 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
10 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
10 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.5 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.3 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.5 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
10 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
4.6 GB
validated
fastq
reads
Ansuman Satpathy, Stanford
1.2 GB
validated

Attribution