IGVFFI5769PLGK

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4389OUWU(interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression)

Summary

cell by CRISPR guide capture in raw feature barcode matrix

Analysis Step Version

/analysis-step-versions/65c095ee-8330-48d0-bc03-d930326fe393/

File Format

pkl

Content Type

raw feature barcode matrix

Content Summary

cell by CRISPR guide capture in raw feature barcode matrix

Aliases

gary-hon:TF_Perturb_Seq_Pilot_Lenti_CM_PrimaryAnalysis_pkl

md5sum

5f41dff8478740c8d71f66669d15343c

File Size

395 MB

Submitted File Name

/project/GCRB/Hon_lab/s215194/Single_Cell/TF_perturb_seq/_pipeline_reporcessing/_combined_cm/aggr_dataframe/aggr_combined_df_full.pkl

Matrix Details

Principal Dimension

cell

Secondary Dimensions

CRISPR guide capture

Samples

4 items

Sample Terms

Summary

IGVFSM0559UNMK

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW279), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM0604KDJF

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW280), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM7499ZWUW

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW278), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM7513BJDT

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW277), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library