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INDEXED
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MatrixFile
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IGVFFI5345SNRS
IGVFFI5345SNRS
released
validated
Json view
File Set
IGVFDS4883TFKC
(principal analysis of Parse SPLiT-seq data)
Analysis Step Version
/analysis-step-versions/1744edca-744a-465d-aacb-afaffa942057/
File Format
h5ad
Content Type
sparse gene count matrix
Content Summary
cell by gene sparse gene count matrix
Aliases
ali-mortazavi:IGVF_B01_LeftCortex_anndata
md5sum
d2e351293d83e4069d94585b0fc1f1fb
File Size
7.1 GB
Submitted File Name
IGVFB01_LeftCortex_annotated_adata.h5ad
Summary
cell by gene sparse gene count matrix
Matrix Details
First Dimension
cell
Second Dimension
gene
Reference Files
2 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI9282QLXO
fasta
genome reference
External Lab, Community
871 MB
validated
IGVFFI9744VSJF
gtf
transcriptome reference
External Lab, Community
29 MB
validated
Files IGVFFI5345SNRS Derives From
8 items
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI1577SBWN
IGVFDS8648GJCE
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
947 MB
validated
IGVFFI2561CRHD
IGVFDS3636WTST
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
IGVFFI3320ZCCE
IGVFDS7323SUVK
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
IGVFFI4726EDUJ
IGVFDS0223KLTB
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.0 GB
validated
IGVFFI7201GVKN
IGVFDS5115IZVN
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
IGVFFI7274KDWO
IGVFDS2413FYLA
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
IGVFFI7974XEFF
IGVFDS2762DTQI
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
IGVFFI9845HLID
IGVFDS9520PLLU
h5ad
sparse gene count matrix
Ali Mortazavi, UCI
1.1 GB
validated
Attribution
Award
HG012077
Principal Investigator(s)
Lior Pachter
,
Kim Green
,
Grant MacGregor
,
Ali Mortazavi
,
Barbara Wold
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI