IGVFFI5102YSIV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7340YDHF(interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression)

Summary

cell by CRISPR guide capture in raw feature barcode matrix

Analysis Step Version

/analysis-step-versions/65c095ee-8330-48d0-bc03-d930326fe393/

File Format

pkl

Content Type

raw feature barcode matrix

Content Summary

cell by CRISPR guide capture in raw feature barcode matrix

Aliases

gary-hon:WTC11_TF_Perturb_Seq_Pilot_iPSC_Lenti_PrimaryAnalysis_pkl

md5sum

79b30557b62d810f62457eb936d0cf00

File Size

589 MB

Submitted File Name

/project/GCRB/Hon_lab/s215194/Single_Cell/TF_perturb_seq/_pipeline_reporcessing/_combined_ipsc/aggr_dataframe/aggr_combined_df_full.pkl

Checkfiles Version

Legacy version of checkfiles

Matrix Details

Principal Dimension

cell

Secondary Dimensions

CRISPR guide capture

Samples

4 items

Sample Terms

Summary

IGVFSM1153INDY

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW287), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM1597KVRS

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW289), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM2726ORRN

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW286), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM9411HZLU

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW288), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library