IGVFFI4463LVNM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7340YDHF(interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression)

Summary

cell by gene expression in sparse gene count matrix

Analysis Step Version

/analysis-step-versions/4cfc022a-ff63-4d13-99f7-257a6bfe4bd7/

File Format

h5ad

Content Type

sparse gene count matrix

Content Summary

cell by gene expression in sparse gene count matrix

Aliases

gary-hon:WTC11_TF_Perturb_Seq_Pilot_iPSC_Lenti_PrimaryAnalysis_h5ad

md5sum

0d2d00c8447e13d056c0a0274f598df6

File Size

19 GB

Submitted File Name

/project/shared/gcrb_igvf/data/shared/TF_Perturbseq_pilot/H5AD/V0.1_TF_Perturbseq_pilot_sgRNACells_filtered_w_embedding_full_ipsc_reprocessed.h5ad

Checkfiles Version

Legacy version of checkfiles

Matrix Details

Principal Dimension

cell

Secondary Dimensions

gene expression

Samples

4 items

Sample Terms

Summary

IGVFSM1153INDY

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW287), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM1597KVRS

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW289), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM2726ORRN

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW286), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM9411HZLU

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) cell line (cellular sub pool: subpool_LW288), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library