IGVFFI4195JWSH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4389OUWU(interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix, unfiltered global differential expression, unfiltered local differential expression)

Summary

cell by gene expression in sparse gene count matrix

Analysis Step Version

/analysis-step-versions/4cfc022a-ff63-4d13-99f7-257a6bfe4bd7/

File Format

h5ad

Content Type

sparse gene count matrix

Content Summary

cell by gene expression in sparse gene count matrix

Aliases

gary-hon:TF_Perturb_Seq_Pilot_Lenti_CM_PrimaryAnalysis_h5ad

md5sum

b14c255b54346e2a74cb7c4e6a705c40

File Size

13 GB

Submitted File Name

/project/shared/gcrb_igvf/data/shared/TF_Perturbseq_pilot/H5AD/V0.1_TF_Perturbseq_pilot_sgRNACells_filtered_w_embedding_full_cm_reprocessed.h5ad

Matrix Details

Principal Dimension

cell

Secondary Dimensions

gene expression

Samples

4 items

Sample Terms

Summary

IGVFSM0559UNMK

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW279), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM0604KDJF

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW280), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM7499ZWUW

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW278), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

IGVFSM7513BJDT

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW277), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library