Home

IGVFFI3987VJYL

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6790TZFT(scRNA-seq: sparse gene count matrix)
Summary
cell by gene expression in sparse gene count matrix
Analysis Step Version
/analysis-step-versions/510ea53b-629a-44c5-994e-db0448935bd0/
File Format
h5ad
Content Type
sparse gene count matrix
Content Summary
cell by gene expression in sparse gene count matrix
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20240212_merged_demux_mtx
md5sum
397256138ab91fe398dc900d6b2b3b84
File Size
1.2 GB
Submitted File Name
/media/RAIDArray/Nick/20240206_PerturbSeq_Exp2/h5_files/tf_perturbseq_rep2_post_cellranger.h5ad
Checkfiles Version
v20
Attribution
Harinder Singh, University of Pittsburgh

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene expression

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Merged filter feature barcode matrix file format
file format specification

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 12 more samples

Files This File Derives From

65 items
fastq
reads
Harinder Singh, University of Pittsburgh
274 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
266 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
273 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.5 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
809 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
2.0 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
18 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
777 MB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
7.6 GB
validated
fastq
reads
Harinder Singh, University of Pittsburgh
1.4 GB
validated

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
2.5 GB
validated