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IGVFFI3984YVBB

revoked
validated
File Set
IGVFDS7323SUVK(Parse SPLiT-seq: sparse gene count matrix)
Summary
cell by gene in sparse gene count matrix
Analysis Step Version
/analysis-step-versions/7575fac5-2297-495f-ad92-000d9acf05f6/
File Format
tar
Content Type
sparse gene count matrix
Content Summary
cell by gene in sparse gene count matrix
Aliases
ali-mortazavi:IGVF_B01_Subpool_2_total+core
md5sum
079fe8d7d7ed4d63718d05015f3ae709
Content MD5sum
fe4499b4bfc4d1495aa2700934b21248
File Size
404 MB
Submitted File Name
IGVF_B01_Subpool_2_total+core.tar.gz
Checkfiles Version
Legacy version of checkfiles
Revoke Detail
This file was revoked due its manifest file containing the incorrect accessions and has been replaced with ali-mortazavi:IGVF_B01_Subpool_2_total+core_replacement.

Matrix Details

Principal Dimension
cell
Secondary Dimensions
gene

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CAST/EiJ (72 days); left cerebral cortex tissue, male, Mus musculus C57BL/6J (72 days); ... and 6 more samples

Reference Files

2 items
fasta
genome reference
GRCm39 genome reference
External Lab, Community
871 MB
validated
gtf
transcriptome reference
GRCm39 GENCODE M32 transcriptome reference
External Lab, Community
29 MB
validated

Files This File Derives From

4 items
fastq
reads
Ali Mortazavi, UCI
12 GB
validated
fastq
reads
Ali Mortazavi, UCI
6.3 GB
validated
fastq
reads
Ali Mortazavi, UCI
12 GB
validated
fastq
reads
Ali Mortazavi, UCI
6.6 GB
validated

Attribution

Award
HG012077
Principal Investigator(s)
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI