IGVFFI3918SCQB

1{
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6        "File",
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10    "analysis_step_version": "/analysis-step-versions/7575fac5-2297-495f-ad92-000d9acf05f6/",
11    "assay_titles": [
12        "Parse SPLiT-seq"
13    ],
14    "audit": {},
15    "award": {
16        "@id": "/awards/HG012077/",
17        "component": "mapping"
18    },
19    "checkfiles_version": "v20",
20    "content_md5sum": "4a4fdc722bc69b8ea3d37eec555f7a59",
21    "content_summary": "cell by gene in sparse gene count matrix",
22    "content_type": "sparse gene count matrix",
23    "creation_timestamp": "2025-04-06T22:55:15.765700+00:00",
24    "derived_from": [
25        "/sequence-files/IGVFFI0431TDDG/",
26        "/sequence-files/IGVFFI7620UXNZ/",
27        "/sequence-files/IGVFFI6597ADXK/",
28        "/sequence-files/IGVFFI2768OGRG/",
29        "/sequence-files/IGVFFI7744CGWE/",
30        "/sequence-files/IGVFFI7419PENH/",
31        "/sequence-files/IGVFFI4423TIPJ/",
32        "/sequence-files/IGVFFI1195ORGS/",
33        "/sequence-files/IGVFFI1180PVFY/",
34        "/sequence-files/IGVFFI7298BUIM/",
35        "/sequence-files/IGVFFI9744XXFN/",
36        "/sequence-files/IGVFFI0151HSRL/",
37        "/sequence-files/IGVFFI8187IPCD/",
38        "/sequence-files/IGVFFI1867PBBD/",
39        "/sequence-files/IGVFFI3181DCAP/",
40        "/sequence-files/IGVFFI5972VZJJ/"
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54        "file_set_type": "intermediate analysis",
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56            {
57                "@id": "/multiplexed-samples/IGVFSM5040DLXV/",
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60                    "Sample",
61                    "Item"
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63                "accession": "IGVFSM5040DLXV",
64                "classifications": [
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66                    "multiplexed sample"
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68                "disease_terms": [],
69                "modifications": [],
70                "sample_terms": [
71                    {
72                        "@id": "/sample-terms/UBERON_0002113/",
73                        "status": "released",
74                        "term_name": "kidney"
75                    },
76                    {
77                        "@id": "/sample-terms/UBERON_0002369/",
78                        "status": "released",
79                        "term_name": "adrenal gland"
80                    }
81                ],
82                "status": "released",
83                "summary": "multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples",
84                "taxa": "Mus musculus",
85                "treatments": []
86            }
87        ],
88        "status": "released",
89        "summary": "Parse SPLiT-seq: sparse gene count matrix"
90    },
91    "file_size": 1423757743,
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93    "href": "/matrix-files/IGVFFI3918SCQB/@@download/IGVFFI3918SCQB.tar.gz",
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96        "/matrix-files/IGVFFI8534GAEL/"
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98    "integrated_in": [],
99    "lab": {
100        "@id": "/labs/ali-mortazavi/",
101        "title": "Ali Mortazavi, UCI"
102    },
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104    "md5sum": "43601821fc5c2ed00229c905909ebb0e",
105    "principal_dimension": "cell",
106    "quality_metrics": [
107        "/single-cell-rna-seq-quality-metrics/25d085ab-43db-4fda-825b-3f13601d9a22/"
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109    "reference_files": [
110        "/reference-files/IGVFFI9282QLXO/",
111        "/reference-files/IGVFFI9744VSJF/"
112    ],
113    "release_timestamp": "2025-04-19T03:57:46.158864+00:00",
114    "s3_uri": "s3://igvf-files/2025/04/06/a8e413fb-7f2c-457f-b4f7-0fdeaade08da/IGVFFI3918SCQB.tar.gz",
115    "schema_version": "7",
116    "secondary_dimensions": [
117        "gene"
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119    "status": "released",
120    "submitted_by": {
121        "@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
122        "title": "Diane Trout"
123    },
124    "submitted_file_name": "igvf_009/igvf_009_Subpool_4_total+core.tar.gz",
125    "summary": "cell by gene in sparse gene count matrix",
126    "upload_status": "validated",
127    "uuid": "a8e413fb-7f2c-457f-b4f7-0fdeaade08da",
128    "workflow": {
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130        "name": "UCI snRNA-seq workflow"
131    }
132}