IGVFFI3575TVLQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9192YMGI(interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix)

Summary

cell by gene expression in sparse gene count matrix

Analysis Step Version

/analysis-step-versions/4cfc022a-ff63-4d13-99f7-257a6bfe4bd7/

File Format

h5ad

Content Type

sparse gene count matrix

Content Summary

cell by gene expression in sparse gene count matrix

Aliases

gary-hon:CM_Pilot_2_PB_RNA_h5ad

md5sum

1e76fdd817cc3519ad3cfdcf6594e7e2

File Size

19 GB

Submitted File Name

/project/shared/gcrb_igvf/data/shared/CMPILOT2_scRNAseq/H5AD/V0_CM_Pilot#02_reprocessed_sgRNACells_filtered_no_embedding_filtered_full.h5ad

Matrix Details

Principal Dimension

cell

Secondary Dimensions

gene expression

Samples

8 items

Sample Terms

Summary

IGVFSM2329UXLZ

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW267), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM2930BIPX

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW265), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM4953FLXN

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW262), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM5652SBGF

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW266), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM7740VKXC

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW261), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM8137TZJW

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW264), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM9326DRHX

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW268), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library

IGVFSM9371INZC

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW263), male, Homo sapiens modified with CRISPRi Sp-dCas9, transfected with a guide library