HCT116 — IGVFSM1725FTKZ

released

Summary

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of SSFA2) modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Sample Terms

HCT116

Classification

cell line

Sex

male

Age

unknown

Taxa

Homo sapiens

Sources

atcc

Sorted From Sample

IGVFSM5418TMHK FACS bin A for 0-10% expression of SSFA2

Aliases

jesse-engreitz:in-vitro-system_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR1-Rep1_S13

jesse-engreitz:in-vitro-system_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR2-Rep1_S19

jesse-engreitz:in-vitro-system_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR3-Rep1_S67

jesse-engreitz:in-vitro-system_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR4-Rep1_S73

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO0384OZRW

igvf:donor_of_HCT116

male

Homo sapiens

File Sets

4 items

IGVFDS0973WJFG

gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR1-Rep1_S13
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR2-Rep1_S19
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR3-Rep1_S67
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin0hrs-FF2-BinA-PCR4-Rep1_S73

Jesse Engreitz, Stanford

IGVFDS2031CTSP

CRISPR degradation, interference FlowFISH screen targeting ITPRID2: differential element quantifications

jesse-engreitz:analysis_set_CRUDO_SSFA2

Jesse Engreitz, Stanford

IGVFDS4597CMXX

cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets