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IGVFDS1589ODOW

released
File Set Type
reporter library
Summary
reporter library targeting candidate cis-regulatory elements genome-wide

Reporter Library Details

Library Construct Scope
genome-wide
Selection Criteria
candidate cis-regulatory elements

Sequencing Results (Illumina)

9 items
Read Names
fastq
reads
R2
2
1.7 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R1
3
10 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R3
2
10 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R3
1
7.5 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R1
2
9.7 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R2
3
1.8 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R3
3
10 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R1
1
6.9 GB
Nadav Ahituv, UCSF
validated
fastq
reads
R2
1
1.3 GB
Nadav Ahituv, UCSF
validated

Integrated Content Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
MPRA sequence designs
GRCh38 MPRA sequence designs
Nadav Ahituv, UCSF
14 MB
validated

File Sets Using This Construct Library Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
Unspecified assay: barcode to element mapping
Nadav Ahituv, UCSF

Applied to Samples

2 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) HEK293T pooled cell specimen transduced (lentivirus) with a reporter library
InVitroSystem
Homo sapiens (male) HepG2 pooled cell specimen transduced (lentivirus) with a reporter library

Documents

2 items
Page
Preview
sequence map
plasmid map
Plasmid map for pLS-SceI in genebank format
plasmid map

Attribution

Award
HG011966
Principal Investigator(s)
Contact P.I.
Jay Shendure
Lab
Nadav Ahituv, UCSF