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INDEXED
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IGVFFI9976DLRC
IGVFFI9976DLRC
released
validated
Json view
File Set
IGVFDS1304DPTZ
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0238LPXN, IGVFFI2016NIXM
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8339_seqspec
md5sum
b4e16948f33f9d2cfbe1fa99c1861fc9
Content MD5sum
5f176b2fbde80ef8b9b335cfb2327d68
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8339_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0238LPXN
fastq
reads
8339
Read 1
Illumina NovaSeq X
22V3MJLT3
4.1 GB
Jason Buenrostro, Broad
validated
IGVFFI2016NIXM
fastq
reads
8339
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
5.7 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8703CYDR
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)