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IGVFFI9938WMET

released
validated
File Set
IGVFDS7598WPXV(gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI5101PVJN, IGVFFI5318WDGT, IGVFFI8644VEVN, IGVFFI2675LZFM
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_iPSC-derived-neurons_VPH_10Xlane4_seqlane2_CS1_seqspec
md5sum
c15912438e19be18a8b81803fdf04e0a
Content MD5sum
3fec35e960c79cd37b34365dfb64dcb7
File Size
1.5 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS7598WPXV_2_CS1_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

4 items
Read Names
fastq
reads
1
Read 2
AAAMCTVHV
2
1.3 GB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
411 MB
Jay Shendure, UW
validated
fastq
reads
1
AAAMCTVHV
2
366 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 1
AAAMCTVHV
2
1.1 GB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane4) modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library