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INDEXED
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ConfigurationFile
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IGVFFI9903ZCFP
IGVFFI9903ZCFP
released
validated
Json view
File Set
IGVFDS1647SMVR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI8034TOUO, IGVFFI1261PUUU
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8398_seqspec
md5sum
0ce78a24958fc392b719218a48ec8be0
Content MD5sum
243d2571f8e08f2864d056b1b31751b2
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8398_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1261PUUU
fastq
reads
8398
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
3.7 GB
Jason Buenrostro, Broad
validated
IGVFFI8034TOUO
fastq
reads
8398
Read 1
Illumina NovaSeq X
22V3MJLT3
2.7 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0974PFBP
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)