{
"@context": "/terms/",
"@id": "/configuration-files/IGVFFI9671ZMXL/",
"@type": [
"ConfigurationFile",
"File",
"Item"
],
"accession": "IGVFFI9671ZMXL",
"aliases": [
"leif-ludwig:measurement2312527008_scRNA_L006_seqspec"
],
"assay_titles": [
"10x multiome with scMito-seq"
],
"audit": {},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping"
},
"checkfiles_version": "v20",
"content_md5sum": "3d12d4fa80a5918c9d1e411eac87eeae",
"content_type": "seqspec",
"creation_timestamp": "2025-03-19T16:12:10.262470+00:00",
"file_format": "yaml",
"file_set": {
"@id": "/measurement-sets/IGVFDS9079ESIO/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS9079ESIO",
"assay_term": {
"@id": "/assay-terms/OBI_0002631/",
"term_name": "single-cell RNA sequencing assay"
},
"controlled_access": true,
"data_use_limitation_summaries": [
"GRU-PUB"
],
"file_set_type": "experimental data",
"samples": [
{
"@id": "/primary-cells/IGVFSM7994IWYP/",
"@type": [
"PrimaryCell",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM7994IWYP",
"classifications": [
"primary cell"
],
"sample_terms": [
{
"@id": "/sample-terms/CL_2000001/",
"status": "released",
"term_name": "peripheral blood mononuclear cell"
}
],
"status": "preview",
"summary": "Homo sapiens (male, 69 years) peripheral blood mononuclear cell",
"taxa": "Homo sapiens"
}
],
"status": "preview",
"summary": "10x multiome with scMito-seq"
},
"file_size": 1483,
"gene_list_for": [],
"href": "/configuration-files/IGVFFI9671ZMXL/@@download/IGVFFI9671ZMXL.yaml.gz",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/leif-ludwig/",
"title": "Leif Ludwig, MDC"
},
"loci_list_for": [],
"md5sum": "a1f770b504bf998fd1d4b1bfa6b8af5a",
"quality_metrics": [],
"s3_uri": "s3://igvf-files/2025/03/19/8b9f9423-7332-4ce0-8e85-fcbb9c0fd513/IGVFFI9671ZMXL.yaml.gz",
"schema_version": "7",
"seqspec_of": [
"/sequence-files/IGVFFI7508WEYT/",
"/sequence-files/IGVFFI1356QQYM/"
],
"status": "preview",
"submitted_by": {
"@id": "/users/8164e524-79d5-4407-8a75-c0ea353d28ea/",
"title": "Ludwig Lab"
},
"submitted_file_name": "/Users/fermel/work/IGVF/seqspecs_samples_6-15/measurement2312527008_scRNA_L006.spec.yaml.gz",
"summary": "seqspec of IGVFFI7508WEYT, IGVFFI1356QQYM",
"upload_status": "validated",
"uuid": "8b9f9423-7332-4ce0-8e85-fcbb9c0fd513",
"validate_onlist_files": true
}