Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI9596GYXI
IGVFFI9596GYXI
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6238XUIY, IGVFFI7345VKMC
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5368_seqspec
md5sum
8c6670f46e80fe038a0da741bab7d063
Content MD5sum
70ad3a055ceb89be41ae033352bd0cfb
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5368_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI6238XUIY
fastq
reads
5368
Read 1
Illumina NovaSeq 6000
22KHF5LT3
5.9 GB
Jason Buenrostro, Broad
validated
IGVFFI7345VKMC
fastq
reads
5368
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
8.6 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)