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INDEXED
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ConfigurationFile
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IGVFFI9559QEAH
IGVFFI9559QEAH
released
validated
Json view
File Set
IGVFDS3638UVNV
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI5709RHHR, IGVFFI5183LDFN
File Format
yaml
Content Type
seqspec
Aliases
bradley-bernstein:SS-LS_2029_seqspec
md5sum
f112b9082ff105c7b02f56b6f8aa12b4
Content MD5sum
aeca5bc22c69c867e5763eb0174a3e71
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2029_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI5183LDFN
fastq
reads
243
Read 2, Barcode index
Illumina NovaSeq 6000
411 MB
Jason Buenrostro, Broad
validated
IGVFFI5709RHHR
fastq
reads
243
Read 1
Illumina NovaSeq 6000
231 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)