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IGVFFI9503PHEI

released
validated
File Set
IGVFDS7938OXSK(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI5362KWQZ, IGVFFI6526BCJI
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5376_seqspec
md5sum
897c1df4b45c11ccb9bf3882ff97a181
Content MD5sum
0560299224a82d8e0f8e2f8fdffe756a
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5376_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5376
Read 1
22KHF5LT3
3.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
5376
Read 2, Barcode index
22KHF5LT3
6.5 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated